Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., sigma-54-dependent Fis family transcriptional regulator from Rhodanobacter sp000427505 FW510-R12

 Score =  235 bits (600), Expect = 2e-66
 Identities = 145/382 (37%), Positives = 209/382 (54%), Gaps = 25/382 (6%)

Query: 153 AIAAATLKMTLTFSELENQAKQTQLRLEELNQEAWSRDSVEIIGNSGPMLAMKADIDVVA 212
           A   ATL+  L + ++    +    RL           ++  +GN+ PML + A I  VA
Sbjct: 96  ATRMATLEFPLRYEKMAEAMRNIYARLL-----GGQSGALRFVGNAAPMLRVNALIRQVA 150

Query: 213 PSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYVNCAAIPENLLESELFGHVKGAFT 272
           P    +L+ GE+G GKE+VAR IH  S R+ +P V +NC AIP  LLESELFGH KG+FT
Sbjct: 151 PFDSTVLVLGESGTGKEMVARAIHAHSPRRDKPFVAINCGAIPAELLESELFGHEKGSFT 210

Query: 273 GADRARMGKFALADGGTLFLDEIGELPLSAQSKILRALQNHEIQPVGQDRVQTVDVRILA 332
           GA  AR G+F +A+GGTLFLDE+G++ L  Q K+LR LQ    + VG  +    DVRI+A
Sbjct: 211 GAISARKGRFEMAEGGTLFLDEVGDMSLPMQVKLLRVLQERAYERVGGSKTLRCDVRIVA 270

Query: 333 ATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERKGDLSLLAGYFVEQ-ARRKLGITQ 391
           AT+R+L++ + + RFR DL++RLSV+P+ +P LRER  DL +L   F ++ ARR LG+  
Sbjct: 271 ATHRNLEESIASDRFREDLFYRLSVFPLELPSLRERLDDLPVLIAEFNQRLARRGLGV-- 328

Query: 392 LKLHGDVLSQLIQYPWPGNVRELEHVINRAAL---KAKARQRGRPVTTLKVEDLGELQG- 447
           ++     +  L  + WPGNVREL +++ R A+     + R    P      + + E+ G 
Sbjct: 329 VRFSASAMQSLCAHAWPGNVRELSNLVERMAILFPHGEVRSSDLPTKYRGQQAVDEVHGA 388

Query: 448 -----------PRAAMVEPTAQDEPMLGEWIGELGLRDATDEFQRHLISETLTQADFNWA 496
                      P  A V+P A+    L E    L L+D   + +  LI + L       A
Sbjct: 389 ALLALMEDELPPSEAAVQPVAETLRTLPE--QGLDLKDHLADIEVGLIRQALDATGGVVA 446

Query: 497 EAARRLQTDRANLTRLAKRLGI 518
            AAR L   R  L    ++ G+
Sbjct: 447 HAARLLHMQRTTLVEKLRKYGL 468