Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  248 bits (632), Expect = 5e-70
 Identities = 144/331 (43%), Positives = 197/331 (59%), Gaps = 7/331 (2%)

Query: 188 SRDSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLV 247
           S   + IIG+  PM  +   I  VAP+  N+LI GE+G GKELVAR +H  S R + P++
Sbjct: 141 SNGEIGIIGSCPPMQDLYGKIRKVAPTDSNVLIQGESGTGKELVARALHNLSKRAKAPMI 200

Query: 248 YVNCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKIL 307
            VNCAAIPE+L+ESELFGH KGAFTGA   R G    ADGGTLFLDEIGELPL AQ+++L
Sbjct: 201 SVNCAAIPESLIESELFGHEKGAFTGASAGRAGLVEAADGGTLFLDEIGELPLEAQARLL 260

Query: 308 RALQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRE 367
           R LQ  EI+ VG  + Q VDVR++AAT+RDLK   + G+FR DLY+RL V  + +P LRE
Sbjct: 261 RVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKIGQFREDLYYRLHVIALKLPALRE 320

Query: 368 RKGDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKAKA 427
           R  D++ +A  F+ +   ++  T LK   D    +  Y WPGNVRELE+ + RA + +++
Sbjct: 321 RGADVNEIAHAFLLRQSARINRTDLKFAPDAEQAIRHYSWPGNVRELENAVERAVILSES 380

Query: 428 RQRGRPVTTLKVEDLGELQGPRAAMVEPTAQDEPMLGEWIGELGLRDATDEFQRHLISET 487
            +    +  + +E L +L+      + P+        E   +L L D    + +H + E 
Sbjct: 381 PEISAELLGIDIE-LSDLEDDDFIGLAPSQGGSNTSHEPTEDLSLED----YFQHFVLE- 434

Query: 488 LTQADFNWAEAARRLQTDRANLTRLAKRLGI 518
             Q      E AR+L   R  L    +RLGI
Sbjct: 435 -HQDHMTETELARKLGVSRKCLWERRQRLGI 464