Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

 Score =  463 bits (1192), Expect = e-135
 Identities = 258/523 (49%), Positives = 339/523 (64%), Gaps = 22/523 (4%)

Query: 6   LSTLLEMTVGLASGANNEERFHRLLDAVRKAVICDCVVLMSLHNDTLTPLAMQGLTRDTL 65
           L+TLL +   L+    ++ER+ RLL A+R  + CD   L+ L  + L PLA+ GL+ DTL
Sbjct: 7   LTTLLPLVSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSPDTL 66

Query: 66  GRRFVVSEHPRLAQICSADLPVRFAADCPLPDPFDGLLLDSEDDLPMHSCMGLPLHFGEQ 125
           GRRF VSEHPR   + S   P RFA+D  LPDP+DGL+   + DL +H CMG PL   E+
Sbjct: 67  GRRFRVSEHPRFQILLSRPEPTRFASDSELPDPYDGLVNAPDADLEVHDCMGCPLMVDER 126

Query: 126 LLGILTLDSLKPDAFDHLSPRSLEILAAIAAATLKMTLTFSELENQAKQTQLRLEELNQE 185
             G++TLD+L P  F  L   +L+  A++AAAT+ +      L  +A+    R E L ++
Sbjct: 127 PWGLVTLDALTPGQFQSLELDALQAFASLAAATVTVAERIEHLALRAEDEHHRAE-LYRQ 185

Query: 186 AWSRDSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQP 245
           A  +D  E+IG S     +  +I +V  S   +LI GETGVGKELVA+ +H+ S+R  +P
Sbjct: 186 ASGQDR-ELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKP 244

Query: 246 LVYVNCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSK 305
           LV +NCAA+P+ L+ESELFGHV+GAFTGA   R GKF LA+GGTLFLDE+GELPL+ Q+K
Sbjct: 245 LVSLNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAK 304

Query: 306 ILRALQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPL 365
           +LR LQ+ ++Q +G DR   VDVR++AATNRDL  EV  G FRAD YHRLSVYP++VPPL
Sbjct: 305 LLRVLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPL 364

Query: 366 RERKGDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKA 425
           RER  D+ LLAGYF+EQ R +LG+  L+L  +  + LI Y WPGNVRELEH+I R+ALKA
Sbjct: 365 RERGRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLIGRSALKA 424

Query: 426 KARQRGRP-VTTLKVEDL---------GELQGPRAAMVEPTAQDEPMLGEWIGELGLRDA 475
             +   RP + TL+  DL         G L  P A +   T            E GLR+A
Sbjct: 425 LGQHPDRPRILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTPP----------EGGLREA 474

Query: 476 TDEFQRHLISETLTQADFNWAEAARRLQTDRANLTRLAKRLGI 518
            D +QR +I   L +   NWA AAR L  DRANL+RLA+RLG+
Sbjct: 475 VDSYQRQVIEACLQRHQDNWAAAARELGLDRANLSRLARRLGL 517