Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., nif-specific transcriptional activator NifA from Magnetospirillum magneticum AMB-1

 Score =  233 bits (595), Expect = 1e-65
 Identities = 133/316 (42%), Positives = 190/316 (60%), Gaps = 8/316 (2%)

Query: 118 LPLHFGEQLLGILTLDSLKPDAFDHLSPRSLEILAAIAAATLKMTLTFSELENQ------ 171
           +P+   ++  G L+++    D+  ++    L  L  +A    +      +L N       
Sbjct: 127 VPIKTTDKPFGALSVERSWSDSAQYVFEHDLRFLTMVATLIGQTASLHRKLANDRETLMT 186

Query: 172 -AKQTQLRLEELNQEAWSRDSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKEL 230
            A +   R+ E+      R   +++G S  M  + A +   AP++  IL+ GE+G GKEL
Sbjct: 187 DAARLHKRMAEVRPTLPIRGLEDVVGTSEAMARVFAQVQQAAPTKATILLRGESGTGKEL 246

Query: 231 VARTIHQRSNRKRQPLVYVNCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGTL 290
           VAR IH  S R ++P + VNCAA+ E++LESELFGH KGAFTGA   R G+F L+ GGTL
Sbjct: 247 VARAIHILSARAQKPFIKVNCAALSESVLESELFGHEKGAFTGAVADRKGRFELSSGGTL 306

Query: 291 FLDEIGELPLSAQSKILRALQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRAD 350
           FLDEIGE+  + Q+K+LR LQ  E + VG ++   VDVR++AATNRDL+  V  G FRAD
Sbjct: 307 FLDEIGEISSNFQAKLLRVLQEGEFERVGGNKTVKVDVRLIAATNRDLEAGVADGSFRAD 366

Query: 351 LYHRLSVYPIYVPPLRERKGDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGN 410
           LY+RL+V P+++PPLRER GD+ LLA YF++Q   + G   L    + L  L +  +PGN
Sbjct: 367 LYYRLNVVPLFLPPLRERSGDIPLLAMYFLKQFNEENG-RGLAFSQNALEALQRCYFPGN 425

Query: 411 VRELEHVINRAALKAK 426
           VRELE+ + R A   K
Sbjct: 426 VRELENCVYRTATMTK 441



 Score = 25.8 bits (55), Expect = 0.004
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 8/87 (9%)

Query: 452 MVEPTAQDEPMLGEWIGEL--GLRDATDEFQRHLISET-----LTQADFNWAEAARRL-Q 503
           MV P A +EP+L E+I E    L D    F    I  T         + +W+++A+ + +
Sbjct: 95  MVVPDAAEEPLLVEYIAENDDSLEDERLSFFCVPIKTTDKPFGALSVERSWSDSAQYVFE 154

Query: 504 TDRANLTRLAKRLGITVSRSHSIERSR 530
            D   LT +A  +G T S    +   R
Sbjct: 155 HDLRFLTMVATLIGQTASLHRKLANDR 181