Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., formate hydrogenlyase transcriptional activator FlhA from Serratia liquefaciens MT49

 Score =  272 bits (695), Expect = 3e-77
 Identities = 171/411 (41%), Positives = 238/411 (57%), Gaps = 31/411 (7%)

Query: 118 LPLHFGEQLLGILTLDSLKPDAFDHLSPRSLEILAAIAAATLKMTLTFSELENQAKQTQL 177
           LPL FG + LG+L L   +PD F+  + R L+ +A   A  +   L + E+ N+ K++ +
Sbjct: 300 LPLVFGNKTLGVLKLAQCQPDNFNAANLRVLQQIAERIAIAVDNALAYQEI-NRLKESLV 358

Query: 178 R-----LEELNQEAWSRDSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVA 232
                  E++N    + D  EI+G S  M A+   +++VA S  ++LI GETG GKEL+A
Sbjct: 359 HENLYLTEQINGN--NPDFGEIVGRSVVMSAVLKQVEMVAKSDCSVLILGETGTGKELIA 416

Query: 233 RTIHQRSNRKRQPLVYVNCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFL 292
           R IH  S R+ Q +V +NCA +P  LLES+LFGH KGAFTGA   RMG+F LAD GTLFL
Sbjct: 417 RAIHNLSERRDQRMVKMNCAVMPAGLLESDLFGHEKGAFTGATNQRMGRFELADKGTLFL 476

Query: 293 DEIGELPLSAQSKILRALQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLY 352
           DE+GE+P+  Q K+LR LQ  E + VG ++V +VDVR++AATNRDL++ V    FR+DL+
Sbjct: 477 DEVGEIPVELQPKLLRVLQEREFERVGGNKVISVDVRLIAATNRDLQQMVADREFRSDLF 536

Query: 353 HRLSVYPIYVPPLRERKGDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVR 412
           +RL+V+PI +PPLRER  D+  L  +   +  R++  T   +  + L  L Q PWPGNVR
Sbjct: 537 YRLNVFPIVIPPLRERPEDIPQLVKFLTYKIARRMKRTIDSIPAETLRLLSQMPWPGNVR 596

Query: 413 ELEHVINRAALKAKARQRGRPVTTLKVEDLGELQGPRAAMVEPTAQDEPMLGEWIGELGL 472
           ELE+VI RA L  +        T L ++ L ELQ P  +M  P  + EP           
Sbjct: 597 ELENVIERAVLLTRG-------TVLNLQ-LPELQYPVPSMALPVPKAEP----------- 637

Query: 473 RDATDEFQRHLISETLTQADFNWA---EAARRLQTDRANLTRLAKRLGITV 520
                E +R  I   L + +   A    AA+RL   R  L    K+ GI V
Sbjct: 638 -SQPGEDERQQIIRVLKETNGVVAGPRGAAQRLGLKRTTLLSRMKKWGILV 687