Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  241 bits (616), Expect = 3e-68
 Identities = 152/393 (38%), Positives = 231/393 (58%), Gaps = 35/393 (8%)

Query: 139 AFDHLSPRSLEILAAIAAATLKMTLTFSELENQAKQTQLRLEELNQEAWSRDSVEIIGNS 198
           AFD+L P+  +I  A+A       L    + +  +Q Q R  +LN       + +IIG +
Sbjct: 98  AFDYL-PKPFDIDEAVA-------LVERAISHYQEQQQPRNVQLNGP-----TTDIIGEA 144

Query: 199 GPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNRKRQPLVYVNCAAIPENL 258
             M  +   I  ++ S  ++LI+GE+G GKELVA  +H+ S R + P + +N AAIP++L
Sbjct: 145 PAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDL 204

Query: 259 LESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLSAQSKILRALQNHEIQPV 318
           +ESELFGH KGAFTGA+  R G+F  ADGGTLFLDEIG++PL  Q+++LR L + +   V
Sbjct: 205 IESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRV 264

Query: 319 GQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERKGDLSLLAGY 378
           G      VDVRI+AAT+++L++ V+ G+FR DL+HRL+V  +++PPLRER+ D+  LA +
Sbjct: 265 GGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARH 324

Query: 379 FVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRAALKAKARQRGRPVTTLK 438
           F++ A R+LG+    LH +  + L +  WPGNVR+LE+      + A  ++       + 
Sbjct: 325 FLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQE-------VL 377

Query: 439 VEDL-GELQGPRAAMVEPTAQDEP-----MLGEWIG-------ELGLRDATDEFQRHLIS 485
           ++DL GEL    + + E T+Q +P     +L +W         +  L +A  E +R L++
Sbjct: 378 IQDLPGELF--ESTVAESTSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLT 435

Query: 486 ETLTQADFNWAEAARRLQTDRANLTRLAKRLGI 518
             L     +  EAAR L   R  LTR  K LG+
Sbjct: 436 TALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 468