Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 692 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

 Score =  258 bits (658), Expect = 7e-73
 Identities = 169/431 (39%), Positives = 236/431 (54%), Gaps = 32/431 (7%)

Query: 98  PFDGLLLDSEDDLPMHSCMGLPLHFGEQLLGILTLDSLKPDAFDHLSPRSLEILAAIAAA 157
           P++ +L D+  +     C+ LPL  G+ +LG+L L   +   F   +   L  +A   A 
Sbjct: 284 PYERMLFDTWGNQIQTLCL-LPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAI 342

Query: 158 TLKMTLTFSELENQAKQTQLRLEELNQEAWSRDSV--EIIGNSGPMLAMKADIDVVAPSQ 215
            +   L + E+    ++       L ++  + DS   EIIG S  M ++   +++VA S 
Sbjct: 343 AVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSD 402

Query: 216 FNILIHGETGVGKELVARTIHQRSNRKRQPLVYVNCAAIPENLLESELFGHVKGAFTGAD 275
             +LI GETG GKEL+AR IH  S R  + +V +NCAA+P  LLES+LFGH +GAFTGA 
Sbjct: 403 STVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGAS 462

Query: 276 RARMGKFALADGGTLFLDEIGELPLSAQSKILRALQNHEIQPVGQDRVQTVDVRILAATN 335
             R+G+F LAD  +LFLDE+G++PL  Q K+LR LQ  E + +G +++   DVR++AATN
Sbjct: 463 AQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATN 522

Query: 336 RDLKKEVEAGRFRADLYHRLSVYPIYVPPLRERKGDLSLLAGYFVEQARRKLGITQLKLH 395
           RDLKK V    FR+DLY+RL+V+PI++PPLRER  D+ LLA  F  +  R+LG     + 
Sbjct: 523 RDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIP 582

Query: 396 GDVLSQLIQYPWPGNVRELEHVINRAALKAKARQRGRPVTTLKVED--LGELQGPRAAMV 453
            + L  L    WPGNVRELE+VI RA L  +       V  L + D  L E + P AA V
Sbjct: 583 AETLRTLSNMEWPGNVRELENVIERAVLLTRGN-----VLQLSLPDIVLPEPETPPAATV 637

Query: 454 EPTAQDEPMLGEWIGELGLRDATDEFQRHLISETLTQADFNWA---EAARRLQTDRANLT 510
                               +  DE+Q  LI   L + +   A    AA+RL   R  L 
Sbjct: 638 VAL-----------------EGEDEYQ--LIVRVLKETNGVVAGPKGAAQRLGLKRTTLL 678

Query: 511 RLAKRLGITVS 521
              KRLGI  S
Sbjct: 679 SRMKRLGIDKS 689