Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains from Enterobacter asburiae PDN3

 Score =  458 bits (1178), Expect = e-133
 Identities = 251/518 (48%), Positives = 332/518 (64%), Gaps = 21/518 (4%)

Query: 4   FSLSTLLEMTVGLASGANNEERFHRLLDAVRKAVICDCVVLMSLHNDTLTPLAMQGLTRD 63
           FS+  L ++ + L +G  +++RF RL+  +R  + CD   L+        PLA+ GL +D
Sbjct: 3   FSVDVLAKIAIELQTGIGHQDRFQRLISTLRHVLECDASALLRYEGRQFIPLAIDGLAKD 62

Query: 64  TLGRRFVVSEHPRLAQICSADLPVRFAADCPLPDPFDGLLLDSEDDLPMHSCMGLPLHFG 123
            LGRRF +  HPRL  I  A   VRF AD  LPDP+DGL+   ++ L +H+C+GLPL  G
Sbjct: 63  VLGRRFTLEGHPRLETIARAGDVVRFPADSDLPDPYDGLI-PGQESLKVHACIGLPLFAG 121

Query: 124 EQLLGILTLDSLKPDAFDHLSPRSLEILAAIAAATLKMTLTFSELENQ--AKQTQLRLEE 181
           + L+G LTLD L PD FD  S   L ++AA+AA  L   L   +LE+Q     +    E+
Sbjct: 122 QNLIGALTLDGLSPDQFDTFSDEELRLIAALAAGALNNALLIEQLESQNILPGSPAAFEQ 181

Query: 182 LNQEAWSRDSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSNR 241
           +          E+IG S  M  +K +I++VA S  N+LI GETG GKELVA++IH+ S R
Sbjct: 182 VTH-------TEMIGLSPGMAQLKKEIEIVAASDLNVLIFGETGTGKELVAKSIHEASPR 234

Query: 242 KRQPLVYVNCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPLS 301
              PLVY+NCAA+PE++ ESELFGHVKGAFTGA   R GKF +AD GTLFLDEIGEL LS
Sbjct: 235 AVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLS 294

Query: 302 AQSKILRALQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPIY 361
            Q+K+LR LQ  +IQ VG DR   VDVR+LAATNRDL++ V AG+FRADL+HRLSV+P+ 
Sbjct: 295 LQAKLLRVLQYGDIQRVGDDRSHRVDVRVLAATNRDLREAVLAGQFRADLFHRLSVFPLT 354

Query: 362 VPPLRERKGDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINRA 421
           VPPLR+R  D+ LLAG+F EQ R ++G++++ L     S L+ Y WPGNVRELEH I+RA
Sbjct: 355 VPPLRDRGDDVLLLAGFFCEQCRLRMGLSRVVLSPGARSHLLSYGWPGNVRELEHAIHRA 414

Query: 422 ALKAKARQRGRPVTT-LKVEDLGELQGPRAAMVEPTAQDEPMLGEWIGELGLRDATDEFQ 480
            + A+A + G  V    +   L +   P  A V P   +E           LR+AT+ FQ
Sbjct: 415 VVLARATRSGDEVVIHARHFALQDETAPAIAQVVPEITNE----------NLREATEAFQ 464

Query: 481 RHLISETLTQADFNWAEAARRLQTDRANLTRLAKRLGI 518
           R +I+  L Q + +WA  AR L+ D ANL RLAKRLG+
Sbjct: 465 RQMITRALEQNNRSWAACARALEMDVANLHRLAKRLGL 502