Pairwise Alignments

Query, 530 a.a., regulatory protein LuxO from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., DNA-binding transcriptional regulator HyfR from Escherichia coli ECRC62

 Score =  258 bits (660), Expect = 4e-73
 Identities = 167/422 (39%), Positives = 238/422 (56%), Gaps = 36/422 (8%)

Query: 114 SCMGLPLHFGEQLLGILTLDSLKPDAFDHLSPRSLEILA---AIAAATLKMTLTFSELEN 170
           S + +PL FG    G L L       F   + + L+ +A   AIA        + ++L+ 
Sbjct: 266 SVLLIPLTFGNHTPGALLLAHTSSTLFSEENCQLLQHIADRIAIAVGNADAWRSMTDLQE 325

Query: 171 QAKQTQLRLEELNQEAWSRDSV-EIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKE 229
             +Q      +L+++  S   V +II  S  M  +   +D+VA S   +LI GETG GKE
Sbjct: 326 SLQQEN---HQLSEQLLSNLGVGDIIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKE 382

Query: 230 LVARTIHQRSNRKRQPLVYVNCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGT 289
           ++AR IHQ S R+ +PLV +NCAAIP +LLESELFGH KGAFTGA     G+F +ADGGT
Sbjct: 383 VIARAIHQLSPRRDKPLVKINCAAIPASLLESELFGHDKGAFTGAINTHRGRFEIADGGT 442

Query: 290 LFLDEIGELPLSAQSKILRALQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRA 349
           LFLDEIG+LPL  Q K+LR LQ  EI+ +G  R   V+VR++AATNRDL + VE  +FR+
Sbjct: 443 LFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRS 502

Query: 350 DLYHRLSVYPIYVPPLRERKGDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPG 409
           DL++RL+V+P+ +PPLR+R  D+ LLA +F ++  R +  +   +  + L QL+ + WPG
Sbjct: 503 DLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRSIDAIPTEALRQLMSWDWPG 562

Query: 410 NVRELEHVINRAALKAKAR--------QRGRPVTTLKVEDLGELQGPRAAMVEPTAQDEP 461
           NVRELE+VI RA L  +          ++ R + TL  +    L+   A ++ PT  +  
Sbjct: 563 NVRELENVIERAVLLTRGNSLNLHLNVRQSRLLPTLNED--SALRSSMAQLLHPTTPE-- 618

Query: 462 MLGEWIGELGLRDATDEFQRHLISETLTQADFNWA---EAARRLQTDRANLTRLAKRLGI 518
                          DE +R  I + L + +   A    AA RL   R  L    +RLGI
Sbjct: 619 --------------NDEEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRLGI 664

Query: 519 TV 520
           +V
Sbjct: 665 SV 666