Pairwise Alignments

Query, 291 a.a., mechanosensitive ion channel family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

 Score = 41.6 bits (96), Expect = 2e-08
 Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 23/158 (14%)

Query: 4   LSIAVDFLLTHKLLLTALILLGVISVRRLVLEHIRGDAALI---------TEKQRKWMSR 54
           L I     L   L  TA++ +G +++   +L  +   +AL+         TE  R   +R
Sbjct: 82  LVIQFGLYLVPDLSKTAILFIGNVALAITILFLVLATSALLNALLDIYARTEHAR---TR 138

Query: 55  TKNGVFTVTLLALFMLWQSEISEFALS---------VTAIAVAIVVASKEIILCFTGSIQ 105
           +  G   +  + LF+     I    +          + A++  I++  K+ +L F  S+Q
Sbjct: 139 SIKGYVQLAKMVLFVFGAIIIVATLIDRSPLLLLSGLGAMSAVILLVYKDTLLSFVASVQ 198

Query: 106 RASSRSFRIGDWIEVGSV--CGEVIEHNLMATVIQEID 141
             S+   R+GDWIE+  V   G+V++  L    +Q  D
Sbjct: 199 LTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFD 236