Pairwise Alignments

Query, 402 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., Nucleoside permease NupC from Sphingobium sp. HT1-2

 Score =  368 bits (944), Expect = e-106
 Identities = 193/437 (44%), Positives = 282/437 (64%), Gaps = 35/437 (8%)

Query: 1   MAILFGIIGVTVLILCAYLLSESRSAINWKTISRALLLQIGFAALVLYFPLGQTALSSLS 60
           M +L G+ G+ +++  A+ LS +R AI  + +  A LLQ G A LVLY P G+  ++ +S
Sbjct: 1   MHLLIGLAGILLILAIAFALSSNRRAIRLRVVGAAFLLQAGIALLVLYVPAGRAIIAGMS 60

Query: 61  NGVSGLLGFADVGIRFLFGDLADT---GFIFAVRVLPIIIFFSALISALYYLGVMQKVIA 117
           +GV+ LLG+A  G  F+FG LA     G  FA+  LP+IIFF++L+S LYYLG+MQ ++ 
Sbjct: 61  HGVANLLGYAQAGTNFIFGPLAKPEIGGASFAIAALPVIIFFASLVSILYYLGIMQFIVR 120

Query: 118 LIGGGIQRFLGTSKAESLVATGNIFLSQGESPLLVRPFLANMTRSELFAVMAGGMASVAG 177
            +GG I++  G SK ESL A  NIF+ Q ESPL++RP+LA +   +LFAVM  GMA VAG
Sbjct: 121 WVGGAIEKVTGVSKVESLCAAANIFVGQSESPLVIRPYLAGLNGPQLFAVMTSGMAGVAG 180

Query: 178 SVLGGYAGLGVELKYLIAASFMAAPGSLMMAKIIVP-----ERGVPIDQS---------- 222
           ++L  YA +G+++ YL+AASFMAAPG L+MAKI++P     E  +P++            
Sbjct: 181 TILAAYASMGIKIDYLLAASFMAAPGGLLMAKIMMPDEPECEPELPLEDDIHLPETRRAA 240

Query: 223 -----------------QVELDKAQDSNLIDALASGAMNGMKVAVAVGTMLIAFVSVIAM 265
                                D+ + +N+I A A GA  G+K+AVAVG M++AFV+++A+
Sbjct: 241 AVAAVLNAETTPGEPMPVATHDEEKPANIIMAAAQGAQTGVKLAVAVGAMVLAFVALVAL 300

Query: 266 VNTGLENLGDLVGFSGITLQAMFGYLFAPLAWVIGIPSHEVLAAGSYIGQKVVMNEFVAF 325
            N  L  +G + G+  ++ Q + GY+F+P+ +++ IP +E   AG   G KVV+NEFVA+
Sbjct: 301 ANGILGGIGGIFGYPELSFQQLLGYVFSPVMYLLNIPWNEAQVAGGLFGTKVVLNEFVAY 360

Query: 326 IDFVEHKALLSEHSQVIITFALCGFANIGSIAIQLGSIGVIAPERRSEVANLGIKAVIAG 385
           I+  + +  LS  +  IITFALCGFAN  SIAIQ+   G +AP +R  +A LG+KA++AG
Sbjct: 361 INLGQVQDGLSPSTIAIITFALCGFANFSSIAIQMAVTGNLAPNQRPMIAKLGLKALVAG 420

Query: 386 TLANLMSACLAGIFISL 402
           +LANLMSA LAG+ +SL
Sbjct: 421 SLANLMSAALAGLMLSL 437