Pairwise Alignments

Query, 402 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., predicted nucleoside transporter (NCBI) from Escherichia coli BW25113

 Score =  350 bits (898), Expect = e-101
 Identities = 186/419 (44%), Positives = 273/419 (65%), Gaps = 21/419 (5%)

Query: 1   MAILFGIIGVTVLILCAYLLSESRSAINWKTISRALLLQIGFAALVLYFPLGQTALSSLS 60
           M I+  ++G+ VL+  A+LLS ++ +I+ +T+  ALLLQI    ++LYFP G+ A+   +
Sbjct: 1   MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAA 60

Query: 61  NGVSGLLGFADVGIRFLFGDLAD---------TGFIFAVRVLPIIIFFSALISALYYLGV 111
            GV  ++ ++D G  F+FG L            GFIFA RVLP IIF +ALIS LYY+GV
Sbjct: 61  LGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGV 120

Query: 112 MQKVIALIGGGIQRFLGTSKAESLVATGNIFLSQGESPLLVRPFLANMTRSELFAVMAGG 171
           M  +I ++G   Q+ L  SK ES VA   IFL Q E P +V+PF+  M R+ELF  +  G
Sbjct: 121 MGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRMNRNELFTAICSG 180

Query: 172 MASVAGSVLGGYAGLGVELKYLIAASFMAAPGSLMMAKIIVPERGVPIDQSQVELDKAQD 231
           MAS+AGS++ GYAG+GV + YL+AAS MA PG ++ A+I+ P      + SQV  +    
Sbjct: 181 MASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFARILSP----ATEPSQVTFENLSF 236

Query: 232 S-----NLIDALASGAMNGMKVAVAVGTMLIAFVSVIAMVNTGLENLGDLVGFSGITLQA 286
           S     + I+A ASGAM G+K+A  V T+++AFV++IA++N  +  +G   GF+  +L++
Sbjct: 237 SETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALINGIIGGIGGWFGFANASLES 296

Query: 287 MFGYLFAPLAWVIGIPSHEVLAAGSYIGQKVVMNEFVAFIDF---VEHKALLSEHSQVII 343
           +FGY+ APLAW++G+   +   AGS IGQK+ +NEFVA++ F   ++    L   +  II
Sbjct: 297 IFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVAYLSFSPYLQTGGTLEVKTIAII 356

Query: 344 TFALCGFANIGSIAIQLGSIGVIAPERRSEVANLGIKAVIAGTLANLMSACLAGIFISL 402
           +FALCGFAN GSI + +G+   I+P+R  E+A LG++A+ A TL+NLMSA +AG FI L
Sbjct: 357 SFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGLRALAAATLSNLMSATIAGFFIGL 415