Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  252 bits (644), Expect = 4e-71
 Identities = 147/385 (38%), Positives = 225/385 (58%), Gaps = 11/385 (2%)

Query: 271 WFLVGTVPVHEVFAEL-----DAVAQR------MMLTTLAVAAIFIFMGIFLANSIAMPI 319
           W L+  +P+  V A+      D  AQR      M +  L +A I + +   + + IA P+
Sbjct: 328 WTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMTIAGLLIAGIGLLVIWLVGHGIARPL 387

Query: 320 NQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVA 379
            Q+     D+ +G+GDL++R+     DE+  ++ GFN F+ K+   I  V  + +++  +
Sbjct: 388 KQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDS 447

Query: 380 AEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQG 439
           +E  +  A+ T+    +Q  +  QV TA+++M AT  ++A NA  AA+ A+ A   A QG
Sbjct: 448 SEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQG 507

Query: 440 RNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEA 499
             +V     +I  LA +I     VV+ LA  ++ I +IL AIRGI+EQTNLLALNAAIEA
Sbjct: 508 MRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEA 567

Query: 500 ARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGV 559
           ARAG+QGRGFAVVADEVRNLA +T  +TEEIQ MI QLQ   ++ V  M+  ++ T + V
Sbjct: 568 ARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESV 627

Query: 560 AASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAE 619
             + +A + L +I+  +  I+D NTQ+A+A EEQS V   IN+N+  I  +       A+
Sbjct: 628 QHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGAD 687

Query: 620 ELADASKSLRELSGRLDKLVGNFKL 644
           E + AS  L +L+ +  +L+  FK+
Sbjct: 688 ESSAASADLTKLAEQQRRLINQFKV 712