Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  241 bits (614), Expect = 8e-68
 Identities = 166/508 (32%), Positives = 261/508 (51%), Gaps = 49/508 (9%)

Query: 143 QDGWFFGFIGSGKPTMVSMFQEANGEVKMFANYQLVNGNTMSGMSKSMDDMVRLLNSFKI 202
           +DG+FFG+                         +L  GN+  G+ KS  D          
Sbjct: 95  KDGYFFGYDSE--------------------TIRLFKGNSPDGVGKSFKDN--------- 125

Query: 203 EDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGASALLNKSGFNLISTDY--QGEEVM 260
            D   V++     +V          SS Q     G + L+ K G+    T+Y  + + V+
Sbjct: 126 RDPNGVYVNRDLVKVGKDGTHYLQYSSTQP----GQTELVPKMGY----TEYLPKWDMVI 177

Query: 261 VASIYIESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFM----GIFLANSIA 316
             S+ ++ ++        V  V A++    + ++L+ L VA + + +    G+ LAN+I 
Sbjct: 178 GTSVNLDGIE------AQVAVVEAKVQKRMEGVLLSILGVAVVLLLVIAAVGMLLANTIL 231

Query: 317 MPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSREL 376
            P++ +     D+  G+GDL++R+ +   DE+  L+  FN F++KIH  ++ + + + +L
Sbjct: 232 RPLHLMKANLDDIAAGEGDLTRRLAITSQDELGDLAGAFNRFVDKIHGLVRQITEMTSQL 291

Query: 377 QVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNA 436
                 VS +A  +    ++QR +T QV TAINQM +   E+A +A  A+  A Q     
Sbjct: 292 TGLVSQVSDQAQRSEQAMERQRHETDQVATAINQMSSAAQEVARSAQGASVAAQQTDAEG 351

Query: 437 DQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAA 496
              + VV+ +   I  L +DI ++G  ++ L      I S+L  IR I+EQTNLLALNAA
Sbjct: 352 QAAKRVVDGSIAQIHALVNDIRSSGVSLDSLQQDVSSIVSVLSVIRSIAEQTNLLALNAA 411

Query: 497 IEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTH 556
           IEAARAG+ GRGFAVVADEVR LASRT +ST+EIQ MI++LQ   + AV AM        
Sbjct: 412 IEAARAGEAGRGFAVVADEVRALASRTQTSTQEIQGMIDRLQTGTEAAVEAMRRSSDAGD 471

Query: 557 QGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTS 616
              A ++EA   L +++  I  I+  N Q+A+A EEQ+ V   IN+++ +I    +    
Sbjct: 472 GTSAQANEAGASLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVAD 531

Query: 617 TAEELADASKSLRELSGRLDKLVGNFKL 644
             +  A  S+SL EL  RL +LVG F++
Sbjct: 532 ETQLGAQTSRSLAELGQRLGQLVGQFRI 559