Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  239 bits (610), Expect = 3e-67
 Identities = 151/416 (36%), Positives = 222/416 (53%), Gaps = 11/416 (2%)

Query: 240 ALLNKSGFNLISTDYQGEEVMVASIYIESMDWFLVGTVP-------VHEVFAELDAVAQR 292
           AL + +    + TD+Q + +   +   E   W ++  VP          + A++DA   R
Sbjct: 300 ALASSTHIRSLRTDHQLKVLAPFAPIPEGKPWGVLLDVPEKVLVGPAEALKAQMDAENTR 359

Query: 293 MMLTTLAVAAIFIFMGIFL----ANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEI 348
             L  L +  +   +G+ L    A S+  PI  +A    D+  G+GDL++R+     DE+
Sbjct: 360 GTLLELGLGLLAAVVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDKQDEL 419

Query: 349 AQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAI 408
            QL+  FN F++K+   I +V ++ ++ +  A+  +  A  T    +QQ  Q  QV TA 
Sbjct: 420 GQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATAS 479

Query: 409 NQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLA 468
           ++M AT  ++A +AA AA+ A  A      G  V+      I  LA D+      VE LA
Sbjct: 480 HEMSATAQDVARSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDMSTAMTQVEGLA 539

Query: 469 STTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTE 528
           + +++IGS+L+ IRGI+EQTNLLALNAAIEAARAG+ GRGFAVVADEVRNLA RT  S E
Sbjct: 540 ANSEKIGSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVE 599

Query: 529 EIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVAT 588
           E + +I  LQN  +  V +M          V    +AV  L  I D +  ISD N Q+A+
Sbjct: 600 ETRLVIEHLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQIAS 659

Query: 589 ATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           A EEQS V   IN N+  I  + E  +  A E A  S++L  L+ +   L+  F++
Sbjct: 660 AAEEQSAVAEEINNNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQFRV 715