Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  266 bits (681), Expect = 2e-75
 Identities = 195/657 (29%), Positives = 326/657 (49%), Gaps = 53/657 (8%)

Query: 12  QMSIKQKVVLGVTLAVLASTLIVGVMAQRQAREVLEHRLVDLELPNILKLIKSDIDHEVL 71
           ++S+K+K+V  V +A+ A T    V A  Q  E    R ++ E  N L+     I    L
Sbjct: 12  RLSLKRKMVFSVVVAI-AVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGDWFL 70

Query: 72  QLLASAQQIASNEFVQQAIATTERDPATEALLVKQLNNLRDQYRLNDASVANRKTAYYWN 131
                 +Q+A     ++     ER+P  E  LV  L        L   S      +YY N
Sbjct: 71  -----GKQLALKGLREEI----ERNPQLE--LVPHLRQT-----LQSGSFG---LSYYGN 111

Query: 132 QNGFL---------RELNQQQDGWFFGFIGSGKPTMVSMFQEANGEVKMFANYQLVN-GN 181
           + G +          + + +  GW+     +GKP     +     +  +    + V    
Sbjct: 112 EQGEMFRQDPSLNTADYDPRVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQG 171

Query: 182 TMSGMSKS---MDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGA 238
            + G++ S   +D +++ + + ++   G+  L N +G++  H  ++ +    +++     
Sbjct: 172 QLIGVAASNLALDKLIKDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEM----- 226

Query: 239 SALLNKSGFNLISTDYQ-------GEEVMVASIYIESMDWFLVGTVPVHEVFAELDAVAQ 291
           SA L  S  N+ + D+        G + ++ +  + + DW LV  +        L+    
Sbjct: 227 SAQLTISKLNIAAKDHSLFQLSMDGRDKVLMAEEVANTDWLLVMVMDK----GVLEQPLN 282

Query: 292 RMMLTTLAVA-AIFIFMGIFLANSIAMPINQ---IAKRFTDLGRGDGDLSQRIEVKGNDE 347
            M++  + +   I + M +  +  +A  +N+   IA    D+  GDGDL++R++V+  DE
Sbjct: 283 DMLMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDE 342

Query: 348 IAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTA 407
           +  L+  FN F++++HQ +K+V + S  L   A+  +  A       + Q+D+   V TA
Sbjct: 343 VGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATA 402

Query: 408 INQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQL 467
           + +M +  +EIASNA   A+ A Q+    + G   + ++K++I +LA ++    +++ +L
Sbjct: 403 VTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISEL 462

Query: 468 ASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASST 527
                EI +IL  IRGI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR L+ RT +ST
Sbjct: 463 EVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHAST 522

Query: 528 EEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVA 587
           EEIQ  I  LQ     AVS M     +    VA  ++    L +IS+ I  ISD  TQ+A
Sbjct: 523 EEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIA 582

Query: 588 TATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           +A EEQS V   IN N E +  +++     A++    +KSL  ++  L+K +  FKL
Sbjct: 583 SAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639