Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  239 bits (609), Expect = 3e-67
 Identities = 148/495 (29%), Positives = 254/495 (51%), Gaps = 37/495 (7%)

Query: 187 SKSMDDMVRLLNSFKIEDTG---------FVFLTNAQGE------VQIHRQKEQVKSSLQ 231
           S   + +++++N +  +DTG         +V L    G+      V  +  +  +  S++
Sbjct: 83  SSGFNKIIKIVNGYAFDDTGNMSEEDAQQYVSLAENHGDAVVVSPVTFNEGQPTITFSVK 142

Query: 232 QIYGSGASALLNKSGFNLISTDYQGE----EVMVASIYIES------------------M 269
           +   S    + N S F+ + TDY  E    E+M     I S                   
Sbjct: 143 RFDESVDFFVFNLSAFSQMMTDYATEGSFAELMANGNVIFSDKHGVNLTPITRPINFAGQ 202

Query: 270 DWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDL 329
           DW L+G + +  + A  D +  ++ L  L  A++ I   + + +    P++++     +L
Sbjct: 203 DWQLIGYIDLTAIQANTDQLNWKITLALLVCASVIIVASVTMLHVSFKPLSRLNTLVANL 262

Query: 330 GRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALV 389
            +G+GDL+QR+ V+  DEI Q+    N FIEK+ Q   DVA +S+E+  A   +S +A  
Sbjct: 263 SQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQARS 322

Query: 390 THDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEA 449
             +   Q   +T Q +TAI +M A+   IA +A  AA    + +  AD+ +  V +A  +
Sbjct: 323 NLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVNS 382

Query: 450 ISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGF 509
           ++ L + + +  + + +++  T++I S+L  I  I+EQTNLLALNAAIEAARAG+QGRGF
Sbjct: 383 VNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRGF 442

Query: 510 AVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVL 569
           AVVADEVR LASRT  ST +I  M+  L+   +N V  MD+ +    +    ++  +  L
Sbjct: 443 AVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDSL 502

Query: 570 MSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLR 629
             ++D + ++++ NT +AT+  EQ  V H +++N+  I  +       A ++   S  L+
Sbjct: 503 NVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNELQ 562

Query: 630 ELSGRLDKLVGNFKL 644
             S  L  +VG F++
Sbjct: 563 NTSHALSDVVGRFRV 577