Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  231 bits (589), Expect = 7e-65
 Identities = 148/470 (31%), Positives = 247/470 (52%), Gaps = 29/470 (6%)

Query: 183 MSGMSKSMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGASALL 242
           +S + K++DD    +N F   + G+VF+T+  G+V IH   +++  +++ IY        
Sbjct: 178 LSRIQKNVDD----INLF---EAGYVFITSNTGKVIIHSNTDELGKNVKDIY-------- 222

Query: 243 NKSGFNL----ISTDYQGEEVMVASIYIESMDWFLVGTVPVHEVFAELDAVAQRMMLTTL 298
             +GF L    +     G    + +  I   DWF++  +        ++    +M    +
Sbjct: 223 --NGFRLDKGKVVLSVNGVNKWLYTSPILGGDWFIIAVIDESIAMQSIN----KMKYELI 276

Query: 299 AVAAIFIFMG----IFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKG 354
             +AI +  G    +F+   +  P+  +     D+  G GDL+++++   + E ++L+ G
Sbjct: 277 FYSAIGLVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALG 336

Query: 355 FNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGAT 414
           FN F E +   I+ +   +  +   AE  + +A V+    +QQ  +  Q+ TA+N+M  T
Sbjct: 337 FNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMT 396

Query: 415 ISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEI 474
            SE+A++A  AA+ A +    + +G +VV++  +AI RL+  I ++ + V++L   T  I
Sbjct: 397 ASEVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRI 456

Query: 475 GSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMI 534
            ++LD I  I++QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT  ST +I ++I
Sbjct: 457 ETVLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEII 516

Query: 535 NQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQS 594
            QLQ  AKN   +MD  K  T   V  +++  + +  +   IH ISD N Q+A+A EEQS
Sbjct: 517 EQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQS 576

Query: 595 TVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
            V   IN N   I  ++   +  A        +        ++L+  FK+
Sbjct: 577 LVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626