Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  228 bits (580), Expect = 8e-64
 Identities = 136/360 (37%), Positives = 204/360 (56%), Gaps = 5/360 (1%)

Query: 288 AVAQRMMLTTLAVA---AIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKG 344
           A AQ   L T+A     A+ +     +   I +P+ Q  +    +    GDL+Q ++V+ 
Sbjct: 281 AAAQAKTLLTVATVLALALGLLAAWAITRQIIIPLRQTLRAAERVA--SGDLTQSLQVQR 338

Query: 345 NDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQV 404
            DE+ QL    +   + + + I  +     ++  AAE +S     T      Q+ +T QV
Sbjct: 339 RDELGQLQASMHRMTQGLRELIGGIGDGVTQIASAAEELSAVTEQTSAGVNNQKVETDQV 398

Query: 405 VTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVV 464
            TA+NQM AT+ E+A NA  A+E A  A   A +G  VV +A   I RLA ++ N+ + +
Sbjct: 399 ATAMNQMTATVHEVARNAEQASEAALMADQQAREGDRVVGEAVAQIERLASEVVNSSEAM 458

Query: 465 EQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTA 524
             L + + +IGS+LD I+ +++QTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA RT 
Sbjct: 459 NLLKTESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQ 518

Query: 525 SSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNT 584
            STEEI+++I  LQ+  +   S MD  + +T   V  +  A   L +I+  +  I   N 
Sbjct: 519 QSTEEIEELIAGLQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLETITRTVSSIQAMNQ 578

Query: 585 QVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           Q+ATA EEQ+ V   IN+++  +  I++ T++ +EE A +S  L  L   L  LVG F+L
Sbjct: 579 QIATAAEEQTAVAEEINRSVMNVRDISDQTSAASEETASSSVELARLGTHLQGLVGRFRL 638