Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  301 bits (770), Expect = 8e-86
 Identities = 187/513 (36%), Positives = 291/513 (56%), Gaps = 16/513 (3%)

Query: 142 QQDGWFFGFIGSGKPTMVSMFQEANG--------EVKMFANYQLVNGNTMSGMSKSMDDM 193
           +Q  W+     +G+  + + +Q A G         VK   N +L+    + G   ++D +
Sbjct: 137 RQRPWYGAAANAGQTVLTAPYQGAVGGLMVTIATPVKSKRNGELIG---VVGGDVTLDTL 193

Query: 194 VRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQVKSSLQQIYGSGASALLNKSGFNLISTD 253
           V ++NS      G  FL +A G+V +   K+QV  +L+ IY    S L   +G   ++ D
Sbjct: 194 VEIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPG--SNLRVAAGMQDVTLD 251

Query: 254 YQGEEVMVASIY-IESMDWFLVGTVPVHEVFAELDAVAQRMMLTTL-AVAAIFIFMGIFL 311
            Q   +  A +  + S  W++  ++   + +A L       ++  L AVAAI   +G+ +
Sbjct: 252 GQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAVAAIAGLLGLLI 311

Query: 312 ANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQ 371
              +  P+  + +   D+  G+GDL++R+ V+  DE  +L+  FN F+E+IH SI +V+ 
Sbjct: 312 P-VLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISEVSS 370

Query: 372 TSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQ 431
            +R +   +E V   +  +   S++Q  +T  V  AIN++GA   EIA NAA A++ A+ 
Sbjct: 371 ATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQHASG 430

Query: 432 ASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLL 491
           AS  A  GR VV +A  A++ L+  I  +   +E L ++T EIG ILD I+GIS+QTNLL
Sbjct: 431 ASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQTNLL 490

Query: 492 ALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAG 551
           ALNAAIEAARAG+ GRGFAVVADEVRNLA RT  S EEI +MI  LQ  ++ AV  M+  
Sbjct: 491 ALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNTS 550

Query: 552 KTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAIN 611
           +  + Q V  +++A + L S++ RI +I   N  VATATEEQ+ VV ++N +I +INA+N
Sbjct: 551 QVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINALN 610

Query: 612 EVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           +       E       L + +GRL +LVG+F++
Sbjct: 611 QQGVENLNETLRHCDQLAQQAGRLKQLVGSFRI 643