Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

 Score =  286 bits (732), Expect = 2e-81
 Identities = 186/600 (31%), Positives = 311/600 (51%), Gaps = 30/600 (5%)

Query: 62  IKSDIDHEVLQLLASAQQIASNEF------VQQAIATTERDPATEALLVKQLNNLRDQYR 115
           I+ D+++ + ++ AS      N F      V+       +DPA    L+ Q         
Sbjct: 38  IREDLENYLAEMGASTSTNIRNLFEGRIKLVENLAQNIAQDPANAETLMGQ--------- 88

Query: 116 LNDASVANRKTAYYWNQNG--FLRELNQQQDG-------WFFGFIGSGKPTMVSMFQEAN 166
             +A +++  T Y    +G   +R   +  DG       W+   + +   T+   + +  
Sbjct: 89  --NALISSFLTVYLGKVDGGFSVRPDAKMPDGYDPRTRPWYKDGMNASGATLTEPYIDMT 146

Query: 167 GEVKMFANYQLVNGNT-MSGMSKSMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQ 225
               +      V+ +  + G   ++D +V+++NS      G+ FL N QG++ +H  K+ 
Sbjct: 147 TNKMVIGILSKVSSSVGVVGGDLALDGLVQIINSLNFGGMGYAFLVNDQGKILVHPDKDL 206

Query: 226 VKSSLQQIYGSGASALLNKSGFNLISTDYQGEEVMVASIY-IESMDWFLVGTVPVHEVFA 284
           V  SL  ++      L  +     + +D Q   +  + I  + S +W++  +V   + F+
Sbjct: 207 VMKSLSDLFPQHTPKLTGE--LTEVQSDGQTRLLTFSPITGLPSANWYIGLSVDKDKAFS 264

Query: 285 ELDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKG 344
            L       ++ T+    I I +   L   +  P++ + +   D+  G+GDL++R+ +  
Sbjct: 265 MLSTFRTSAVIATVVAVVIIIGLLGLLIRVLMQPLHTMTRAMEDIAEGEGDLTKRLHIHS 324

Query: 345 NDEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQV 404
           +DE   L   FN F+E+IH SI++V+  + ++   A  V   +  +  NS +Q ++T  V
Sbjct: 325 HDEFGVLGNAFNRFVERIHSSIREVSSATEQVNEVALRVISASNSSMTNSDEQSNRTNSV 384

Query: 405 VTAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVV 464
             AIN++GA   EIA NAA A++ A+ A   A++G+ VV +   A++RL+  I  +   +
Sbjct: 385 AAAINELGAAAQEIAGNAAQASQHASSARLLAEEGQQVVERNIAAMNRLSDLIVTSSAHI 444

Query: 465 EQLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTA 524
           E L S T  IG IL+ I  IS+QTNLLALNAAIEAARAG+ GRGFAVVADEVRNLA RT 
Sbjct: 445 ETLNSKTVNIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQ 504

Query: 525 SSTEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNT 584
            S +++Q MI +LQ  A+ +V  M+  +  +   +  +++A + L S++ RI +I   N 
Sbjct: 505 ESAQQVQTMIEELQVGARESVDTMEQSQRHSQDSMQIANQAGERLDSVTVRIGEIDGMNQ 564

Query: 585 QVATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
            VATATEEQ+ VV  IN +I EIN +N+      +    A   L + +GRL  LVG+F++
Sbjct: 565 SVATATEEQTAVVEAINMDINEINMLNQEGVENLQATLRACSDLEQQAGRLKHLVGSFRI 624