Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  365 bits (937), Expect = e-105
 Identities = 221/645 (34%), Positives = 357/645 (55%), Gaps = 10/645 (1%)

Query: 9   KLHQMSIKQKVVLGVTLAVLASTLIVGVMAQRQAREVLEHRLVDLELPNILKLIKSDIDH 68
           ++ + SI+ +++  +  A+LAS L+V ++       + +  LVD  LP  ++ I++DI+ 
Sbjct: 2   RIWRKSIQLQLITSMGAALLASILVVVIIFTVALNRLTDRYLVDTALPASIEAIRNDIER 61

Query: 69  EVLQLLASAQQIASNEFVQQAIATTERDPATEALLVKQLNNLRDQYRLNDASVANRKTAY 128
            + Q L +A  IA N  ++  +A  E DPA     ++ L   + +        A+ +T +
Sbjct: 62  MLGQPLVAAADIAGNTLLRDWLAAGE-DPAQAPQFIEYLTAAKQRNHAFTTLFASTETGH 120

Query: 129 YWNQNGFLRELNQQ--QDGWFFGFIGSGKPTMVSM-FQEANGEVKMFANYQLVNGNTM-- 183
           Y+N+NG  R L++   +D WF+G+I SG    +++    A GE+ +F +Y++     +  
Sbjct: 121 YYNENGLDRTLSRSNPKDKWFYGYIDSGAERFINIDIDGATGELALFIDYRVEKEGKLVG 180

Query: 184 -SGMSKSMDDMVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKE-QVKSSLQQIYGSGASAL 241
            +GM   M ++ +L++ F   + G VFL    G +Q+H       K  L +  G+ A+  
Sbjct: 181 VAGMGLRMTELSKLIHDFSFGEHGKVFLVRNDGLIQVHPDAAFSGKRQLAEQLGADAAKG 240

Query: 242 LNKSGFNLISTDYQ--GEEVMVASIYIESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLA 299
           +   G +L S+ +   GE  +   + +  ++W LV  VP  E++A++        L   A
Sbjct: 241 VMTGGESLRSSRFSRDGERYLALGLPLRDLNWTLVAEVPESEIYAQMHQAVWLTSLIGGA 300

Query: 300 VAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFI 359
           VA + + + + LA  +  PI ++      +G G GDLS R++    DE+  L++GFN F+
Sbjct: 301 VALVSLLLVVLLARGLVRPIRRVTAALVQIGSGAGDLSHRLDDSRQDELGDLARGFNRFL 360

Query: 360 EKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIA 419
           +     I +V  TS  L+ A E V++    T + S +Q++ T  V TA+++MG T+ +IA
Sbjct: 361 DSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAERSGRQQEMTEMVATAVHEMGLTVQDIA 420

Query: 420 SNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILD 479
            NA  AA+ +  A   A Q R VV ++   I  ++ DI      V QLA     +  +L 
Sbjct: 421 RNAGDAAQASQSARDEALQAREVVQRSIRGIEGMSGDIGKAADAVSQLADEVASVDEVLA 480

Query: 480 AIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQN 539
            IR ISEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RT  ST+E+Q+MI +L+ 
Sbjct: 481 VIRSISEQTNLLALNAAIEAARAGEMGRGFAVVADEVRTLARRTQLSTDEVQQMIQRLKL 540

Query: 540 DAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHT 599
            A +AVS+M AG+  T  GV +S      L +I+D++  ISD N QVATATEEQS V   
Sbjct: 541 GAGSAVSSMQAGQQATGSGVESSQRTGASLSAITDQVEHISDMNHQVATATEEQSAVTEE 600

Query: 600 INQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           IN+ ++ I+ +   T +  +   +  ++LR L+  L + +G F+L
Sbjct: 601 INRTVQGISDLARETAAEVQGCREECQALRGLADDLARQMGGFRL 645