Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  258 bits (659), Expect = 6e-73
 Identities = 159/479 (33%), Positives = 265/479 (55%), Gaps = 19/479 (3%)

Query: 183 MSGMSKSMDDMVRLLNSFKIEDTGFVFLTNA-QGEVQIHRQKEQV--KSSLQQI------ 233
           + G+   +  + +++++ + E+ G  FL +  Q  V   +Q + +   SS++        
Sbjct: 197 VGGVDILISTVGKVIDAIRYEEQGTAFLLDENQNIVYFPKQSKALPLSSSIRNFDSVFDS 256

Query: 234 ---YGSGASALL-NKSGFNLISTDYQGEEVMV----ASIYIESMDWFLVGTVPVHEVFAE 285
              +G  AS +  N+SG  ++   ++GE+ +     A +    M+W L   +P   + + 
Sbjct: 257 TEGFGKLASNIAANESG--IVHVTWKGEDYVAVFEHAQLTNPQMNWSLGILIPASIIDSP 314

Query: 286 LDAVAQRMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGN 345
           ++      ++    +  +   +  F +  +  P+ ++     ++  GDGDL++R+EVK N
Sbjct: 315 INNAITTAIIVAFVIIGLIALITYFASAKVTQPLVEMRNAMAEIAHGDGDLTKRLEVKSN 374

Query: 346 DEIAQLSKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVV 405
           DEI  L+  FN F +K+   +KD A  ++ +  AA+ +   +  T     Q+R Q   V 
Sbjct: 375 DEIGALAIEFNTFTDKLRSLLKDTAANTKAVSDAADHLRDVSHATSKEINQERSQVDNVS 434

Query: 406 TAINQMGATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVE 465
           TA+ QM AT+ EI+ NAA +++ A +A      G   V  A   I  LA  I    +VV 
Sbjct: 435 TAVTQMAATVVEISKNAAQSSDAATKADELVQAGSEQVQDAMREIRALADAISQGVEVVG 494

Query: 466 QLASTTQEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTAS 525
            L+  +  IG+++D I  I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR+LASRT  
Sbjct: 495 GLSKESDSIGAVVDVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQE 554

Query: 526 STEEIQKMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQ 585
           ST +I+KM+ +LQ  ++   S M  G+T +  GV  +++ V+ L  I+  I  + +++T 
Sbjct: 555 STTDIRKMVERLQAMSEQTNSVMQEGQTRSQSGVDKTEKVVETLKDITQSIGLVHEQSTH 614

Query: 586 VATATEEQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           +A ATE+Q+ V   IN+++  I  +++ T+  AEELA  +  L  +SG L +LVG FK+
Sbjct: 615 IALATEQQTEVAQDINKSLVAITGLSDKTSQHAEELAVEATQLSAVSGDLKELVGQFKI 673