Pairwise Alignments

Query, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  505 bits (1300), Expect = e-147
 Identities = 273/634 (43%), Positives = 415/634 (65%), Gaps = 4/634 (0%)

Query: 14  SIKQKVVLGVTLAVLASTLIVGVMAQRQAREVLEHRLVDLELPNILKLIKSDIDHEVLQL 73
           SIKQK+++ + +AVLA+ ++VG ++Q  AR++++  + +L+LP++LK + + +D E   +
Sbjct: 4   SIKQKLIISLIVAVLAAAILVGSISQWIARDLVKENMEELQLPSLLKQVGNRVDREASVM 63

Query: 74  LASAQQIASNEFVQQAIATTERDPATEALLVKQLNNLRDQYRLNDASVANRKTAYYWNQN 133
           L  A  IASN  +  A ++   D A E  L+  L+N+ +   L  AS  +R T  YWNQ+
Sbjct: 64  LTVAHGIASNPDIL-AWSSAGADSAGERRLLSYLSNIVEFNDLTVASFVDRTTYKYWNQD 122

Query: 134 GFLREL-NQQQDGWFFGFIGSGKPTMVSMFQEANGEVKMFANYQLVNGNTMSGMSKSMDD 192
           GFLR L N + DGWFF +  SG+P  +S++ E     ++FANYQ VNG  MSG++KS+D+
Sbjct: 123 GFLRVLQNDEFDGWFFAYKNSGEPISLSLYNEPGQGYRLFANYQQVNGRGMSGVAKSVDE 182

Query: 193 MVRLLNSFKIEDTGFVFLTNAQGEVQIHRQKEQV-KSSLQQIYGSGASA-LLNKSGFNLI 250
           ++ ++N+ KI  TGFVFL +  G +  H   E + K+ L  I  S  S  LLN+ GF + 
Sbjct: 183 LLDIINAVKIAQTGFVFLVDGNGTIIAHPNTELLGKAKLASISDSSTSGQLLNRQGFAMA 242

Query: 251 STDYQGEEVMVASIYIESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIF 310
           ++D  G+  + AS Y+E   W++V  VP HE++A L+A ++++++  L +A  F  +GI+
Sbjct: 243 TSDAAGDTQLFASTYVEKAGWYVVAQVPEHELYASLNAGSRQIIIWALVIAGAFALIGIW 302

Query: 311 LANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVA 370
           LA ++  P+  +A  F  LGRG GDL  RI +    EIA+L +GFN FI+ +H +I  VA
Sbjct: 303 LAGTLTKPLESLADVFQQLGRGQGDLRSRIPMPEQKEIARLVEGFNNFIDHLHGTISQVA 362

Query: 371 QTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETAN 430
           +TS  L+ +A+ V++++  T ++++ QRDQT+Q   A+ +MG+T++E+A +A  AA+ AN
Sbjct: 363 KTSHALKASAQDVAKQSHQTENSTKSQRDQTLQAAAALTEMGSTVNEVAQSATHAAQNAN 422

Query: 431 QASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNL 490
            A+ N+  GR +  +A  AI+ L+  I++  +V++ L   T  IG ILD IRGISEQTNL
Sbjct: 423 MATTNSAHGREITQRAVHAINGLSGQIQDVSRVIQSLDEHTAAIGGILDTIRGISEQTNL 482

Query: 491 LALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDA 550
           LALNAAIEAARAGD GRGF+VVADEVR LA R A +T+EIQ  I++ Q D+K+AVS M++
Sbjct: 483 LALNAAIEAARAGDHGRGFSVVADEVRTLAQRAAQATDEIQVKIDKFQQDSKSAVSQMES 542

Query: 551 GKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAI 610
            +  T   V A++E  ++L  I++ I  I+D NTQVATATEEQ+TVV  I++NI +I+A 
Sbjct: 543 SRARTTDVVTATNEIDKLLQDIAEEIAHINDVNTQVATATEEQATVVEDISRNINDISAS 602

Query: 611 NEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644
           +E T +  + L   S  L EL+  L   V  FKL
Sbjct: 603 SEETLNATKILVSVSDKLDELAQELSSEVSRFKL 636