Pairwise Alignments

Query, 646 a.a., VWA domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  264 bits (674), Expect = 9e-75
 Identities = 187/571 (32%), Positives = 278/571 (48%), Gaps = 46/571 (8%)

Query: 4   LIFLYPHWLG----LLVPLLLLAAWRGLRQNQRG----LIAP---HLAQALGIETRTRRS 52
           +I L+PHW      LL+PLL    W    + +R     +I P   H     G   R  +S
Sbjct: 1   MIDLWPHWFRPGWLLLLPLLGWLLWHLWHRQKRAGRWQMILPAAFHAVLLRGGNGRESKS 60

Query: 53  FGGVLALSWIVATLAMAGPSWQSAERPSVQNSAARVLIMDMSRSMYATDLAPNRLTQARY 112
              +L ++W++A LA+ GPSWQ  E+ S + S   V++++++  M ATD  PNRL QAR 
Sbjct: 61  PWVLLGIAWLLAVLALLGPSWQRVEQSSQKPSDPLVVLLELTPEMLATDSPPNRLEQARR 120

Query: 113 KALDLLKGWQEGSTGLVAYAADAYVVSPLTSDSATLANLLPNLSPDIMPYQGSDAAAAVS 172
           K  D+L+   +  T +V YA  A+ + PL+ D AT  NLL  L P IMP  G  A  AV 
Sbjct: 121 KLYDVLQARTDAQTAIVVYAGSAHTLVPLSDDLATSRNLLDALRPSIMPEAGHRADLAVE 180

Query: 173 LAITMLQQSGHQQGDLILITDDMSVTEREKLISLLQG--SPWRLVTLAIGTPSGAPIPLG 230
            A+ +L+Q G  QG L+LI   +S  ER+ +  LLQ   SP  L  L IG+  G P+   
Sbjct: 181 KALGLLKQGGLGQGRLLLIGSSLSKQERQGIRLLLQNAQSP-TLSILGIGSREGTPVTQE 239

Query: 231 DGSLLKDRQGQTVIAKTAFDQLQQLSQSVQGVLTAYRADGADVAHILSLTQQPIDIAEST 290
            G  LKD QG  ++ +     L+  +  + G   A R D  D+   L +   P  +    
Sbjct: 240 SGEFLKDEQGAILVPRLDSPTLKAFASEMGGRYRAARLDDKDLRQ-LGVLDPPQTLRNDG 298

Query: 291 SRQAITERVNNGYWLVLPLLIAALCLFRRGVIFSL-LLLFGVSLPNQQ-AWASAWLNQDQ 348
               +    + GYWL+LPLL+ A C  RRG +F L LLL     P+   +    WL  DQ
Sbjct: 299 QLLRLDTWADQGYWLLLPLLLLAACAGRRGWLFCLPLLLLSAPQPSYAFSLQDLWLRPDQ 358

Query: 349 QAMRMFNNEQYAQAAEAFRDPRWQGAARYYAKDYQGAIDAYSQIANPDTATQYNLANAYA 408
           Q   +   ++ A+AAE F DP+W+G A Y A +Y  AI  +++    D  + YN  NA A
Sbjct: 359 QGQYLLKKKRPAEAAEHFEDPQWKGVALYEAGNYAEAIKLFAE--GNDAYSHYNRGNALA 416

Query: 409 QAGELQKAQDLYEHVLKQEPNHQDARHNLDVVKAAQQQQQQQQQQQQQQQQQQQQQQQQQ 468
           ++GEL+ A D YE  L+ +P+ Q A  N  +V+A  Q++ + +  Q  + +  +  Q  Q
Sbjct: 417 RSGELEAAIDAYEQALEAQPDLQPALKNKALVEALVQERDEPEPTQPAKNEDDETTQPGQ 476

Query: 469 QQQQQQQQQQQQQQQQQQQQQDSSSGASGQEAQEDSSANPSNTAQEQEASSQTK-GASTP 527
             Q                      GASGQ A   +   PS+  Q +  +  T+ G+ +P
Sbjct: 477 TAQ---------------------PGASGQNA---TGGEPSSQGQGESGTDDTQAGSPSP 512

Query: 528 DPQQDL--QESTEPKANAKPQEQPNAVDDAQ 556
            P  ++   E  + +    P    NA  D +
Sbjct: 513 PPGNEVPGSELGDEQTTTPPLRPDNASLDGE 543



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 20/154 (12%)

Query: 499 EAQEDSSANPSNTA------QEQEASSQTKGASTPDPQQDLQESTEPKANAKPQEQPNAV 552
           EAQ D      N A      QE++    T+ A   D      E+T+P   A+P     + 
Sbjct: 433 EAQPDLQPALKNKALVEALVQERDEPEPTQPAKNED-----DETTQPGQTAQPGA---SG 484

Query: 553 DDAQAGEPSAH---REQSKDSQNGQPSGTEQNDEQSDKANAAQPSTSVTTSSDPNLDPML 609
            +A  GEPS+       + D+Q G PS    N+    +    Q +T      + +LD   
Sbjct: 485 QNATGGEPSSQGQGESGTDDTQAGSPSPPPGNEVPGSELGDEQTTTPPLRPDNASLDGEH 544

Query: 610 RK-LEQ--VESARDPSALLRAQFILQAQRKPQPT 640
           R+ LEQ   E   +P  LLR +F  + Q+    T
Sbjct: 545 RQALEQWLQEIPDNPGELLRRKFWYEQQQHQDKT 578