Pairwise Alignments

Query, 710 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  104 bits (259), Expect = 1e-26
 Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 19/254 (7%)

Query: 447 GWTAMTMLTDKGTPIAFIAAD----NLIRRSPLTSQLREVIRMFASNLTEVLMRAKAQEA 502
           GW     LT     IA +A D     L    P T+   EV ++   +L    M AK   A
Sbjct: 331 GWLLAQRLTRPLRQIASVARDIGAGRLDTSIPTTAGSSEVKQL---SLALAGMTAKLVSA 387

Query: 503 ISVLNETLELEVRNRTRDLQKANEKLDLMAKLDPLTRLGNRRMLEHQLEQTCEQTIKEVV 562
               N  LE  V+ RT  L+ AN +LD  A+ D LT L NR  +E +L+Q    +  +  
Sbjct: 388 ----NAELEQRVKERTAALETANAELDRQARFDALTGLLNRHGMEERLQQALAVSNPDTA 443

Query: 563 NYGVILLDIDHFGLFNNCYGHLEGDIALMRIGNILSRHAQSEHELFCRIGGEEFLLLVAN 622
             G++++DIDHF   N+ +GH  GD+ L  +  ++    + + ++  R+GGEEF+L++  
Sbjct: 444 PLGIVMIDIDHFKSVNDRFGHATGDLVLKAVAGLMKSRLR-KSDIAARLGGEEFVLMLPG 502

Query: 623 RSAEEIHLLAENIRKSIEAECIEHCENPSGELLTVSIGYAASRYKPREIQFDQLYAEADK 682
            +A E    A ++ + +    I+    P G  +T+S G   S+    +         ADK
Sbjct: 503 ANAAEAMQTATDLVRLVGEAFID----PVGH-ITISCG--VSQMLREDDSVASALRRADK 555

Query: 683 ALYRAKSQGRNQVI 696
           ALY AKS GRN+ +
Sbjct: 556 ALYAAKSLGRNRAM 569