Pairwise Alignments

Query, 160 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., L,D-transpeptidase from Variovorax sp. SCN45

 Score = 53.9 bits (128), Expect = 4e-12
 Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 20/138 (14%)

Query: 25  VKVDKSKRRMYLLQ----GNEIIREYRIALGKSPKGHKQQEGDQRTPEGHYLLDFIIEDS 80
           + VD S+ R+YL +    G ++  +Y I++GKS    K  EGD RTP G Y +   ++  
Sbjct: 209 IAVDASRSRLYLFENSDKGLKLTADYYISVGKSGTD-KATEGDARTPLGVYYITSSLDPK 267

Query: 81  S---FY--RSIHISYPNTRDLQLAQLRGVNPGGDIKIHGLKNGDEREPGFVQSFDWTNGC 135
           S   FY   ++ I+YPN  D++    RG   GG I +HG          F ++   ++GC
Sbjct: 268 SLKDFYGAGALPINYPNPYDVR----RG-KTGGGIWLHGTP-----PQQFARAPLASDGC 317

Query: 136 IAITNQEMDEFLSLVQPG 153
           + + N ++ + L  VQ G
Sbjct: 318 VVMANPDLKQLLRKVQIG 335