Pairwise Alignments

Query, 411 a.a., transposase from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., Tryptophan-specific transport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  335 bits (858), Expect = 2e-96
 Identities = 181/405 (44%), Positives = 253/405 (62%), Gaps = 7/405 (1%)

Query: 12  PSLFGGACIIASVCVGAGMLGLPSAGAGAWTLWSMLALALTMAVMTLSGWMLLEAFKHYD 71
           PSL GG  II    +GAGM  LP   +GAW  WSM AL  T   M  SG M+LEA  +Y 
Sbjct: 11  PSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALVFTWFCMLHSGLMILEANLNYR 70

Query: 72  LRVSFNTVTKDMLGSHINRFNNLTVYFVGGILLYAYITSSGLILQDL-----LHINSKIA 126
           +  SF+T+TKD+LG   N  N +++ FV  IL YAYI++SG IL        L++ ++ A
Sbjct: 71  IGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAA 130

Query: 127 SILFVAVFSAFVWHSTRAVDRISVILIVFMVLSFIFGVSGLAINVKTSILFDTLNQSGEY 186
              F  + +  VW ST+AV R++ I++   V++F      L  +V+ + LF+       Y
Sbjct: 131 GFAFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESHASY 190

Query: 187 APYAMAMLPVALTSFGYHHSVSSMRAYYGEE-RKAKYAILGGTVIALSLYALWLFSIFGN 245
            PY +  LP  L SFGYH +V S+  YYG++ R     ++ GT++AL+LY++WL    GN
Sbjct: 191 TPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLIYGTLLALALYSVWLLGTMGN 250

Query: 246 LPRADFAPVIQQGGNVDVLLKALGSVVESEKVSQAINAFSMAAILSSFIGVGLGVFDFLA 305
           +PR +F  + Q+GGN+DVL++AL  V+ S  +   +  FS  A+ SSF+GV LG+FD+LA
Sbjct: 251 IPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLA 310

Query: 306 DLFQFSNCKQGRTKTWLVTFLPPLILSLLFPFGFIIAIGYAGAAATIWACIIPVLLARKS 365
           DLF F +   GR KT L+TFLPP+I  LL+P GF+ AIGYAG AATIWA I+P LLARKS
Sbjct: 311 DLFGFDDSAMGRFKTALLTFLPPMIGGLLYPNGFLYAIGYAGLAATIWAAIVPALLARKS 370

Query: 366 RTLANGAQGFVVPGGNLALGLVLIFGVLTAVFHMMAMANLLPAFK 410
           R    G+  F V GG   + L+L+FGV  A+ H+++  NLLP ++
Sbjct: 371 RE-RFGSPKFRVWGGKPMIVLILLFGVGNALVHILSSFNLLPVYQ 414