Pairwise Alignments

Query, 411 a.a., transposase from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., low affinity tryptophan permease TnaB from Escherichia coli ECRC62

 Score =  280 bits (716), Expect = 6e-80
 Identities = 161/409 (39%), Positives = 230/409 (56%), Gaps = 10/409 (2%)

Query: 10  KQPSLFGGACIIASVCVGAGMLGLPSAGAGAWTLWSMLALALTMAVMTLSGWMLLEAFKH 69
           K+ S F G  +IA   +G GM  LP   AGAW  W    L +    M  SG +LLEA  +
Sbjct: 7   KKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAFILIIAWFSMLHSGLLLLEANLN 66

Query: 70  YDLRVSFNTVTKDMLGSHINRFNNLTVYFVGGILLYAYITSSGLILQDLL------HINS 123
           Y +  SFNT+TKD++G+  N  + +TV FV  IL YAYI+++G I+ + +      H N 
Sbjct: 67  YPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTYAYISANGAIISETISMNLGYHANP 126

Query: 124 KIASILFVAVFSAFVWHSTRAVDRISVILIVFMVLSFIFGVSGLAINVKTSILFDTLNQS 183
           +I  I      ++ +W S+ A  RI+ + +   ++SF+         V  SIL D  + +
Sbjct: 127 RIVGICTAIFVASVLWISSLAASRITSLFLGLKIISFVIVFGSFFFQVDYSILRDATSTT 186

Query: 184 G--EYAPYAMAMLPVALTSFGYHHSVSSMRAYYGEER-KAKYAILGGTVIALSLYALWLF 240
               Y PY    LPV L SFG+H ++ S+   YG+ + K   +++ G+++AL +Y  WL+
Sbjct: 187 AGTSYFPYIFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGSLLALVIYLFWLY 246

Query: 241 SIFGNLPRADFAPVIQQGGNVDVLLKALGSVVESEKVSQAINAFSMAAILSSFIGVGLGV 300
              GN+PR  F  +I  GGNVD L+K+     +   +   +  FS  A+ SSF GV LG+
Sbjct: 247 CTMGNIPRESFKAIISSGGNVDSLVKSFLGTKQHGIIEFCLLVFSNLAVASSFFGVTLGL 306

Query: 301 FDFLADLFQFSNCKQGRTKTWLVTFLPPLILSLLFPFGFIIAIGYAGAAATIWACIIPVL 360
           FD+LADLF+  N   GR KT L+TFLPP +L L+FP GFI  IG AG  ATIWA IIP +
Sbjct: 307 FDYLADLFKIDNSHGGRFKTVLLTFLPPALLYLIFPNGFIYGIGGAGLCATIWAVIIPAV 366

Query: 361 LARKSRTLANGAQGFVVPGGNLALGLVLIFGVLTAVFHMMAMANLLPAF 409
           LA K+R      Q F V GGNL   +V++FG+   +     + N+LP F
Sbjct: 367 LAIKARKKFPN-QMFTVWGGNLIPAIVILFGITVILCWFGNVFNVLPKF 414