Pairwise Alignments

Query, 411 a.a., transposase from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., tryptophan transporter of high affinity from Escherichia coli BL21

 Score =  331 bits (849), Expect = 2e-95
 Identities = 179/405 (44%), Positives = 253/405 (62%), Gaps = 7/405 (1%)

Query: 12  PSLFGGACIIASVCVGAGMLGLPSAGAGAWTLWSMLALALTMAVMTLSGWMLLEAFKHYD 71
           PSL GG  II    +GAGM  LP   +GAW  WSM AL  T   M  SG M+LEA  +Y 
Sbjct: 11  PSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGLMILEANLNYR 70

Query: 72  LRVSFNTVTKDMLGSHINRFNNLTVYFVGGILLYAYITSSGLILQDL-----LHINSKIA 126
           +  SF+T+TKD+LG   N  N +++ FV  IL YAYI++SG IL        L++ ++ A
Sbjct: 71  IGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAA 130

Query: 127 SILFVAVFSAFVWHSTRAVDRISVILIVFMVLSFIFGVSGLAINVKTSILFDTLNQSGEY 186
              F  + +  VW ST+AV R++ I++   V++F      L  +V+ + LF+    +  Y
Sbjct: 131 GFGFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESNASY 190

Query: 187 APYAMAMLPVALTSFGYHHSVSSMRAYYGEERKAKY-AILGGTVIALSLYALWLFSIFGN 245
           APY +  LP  L SFGYH +V S+  YYG++ K     ++ GT++AL+LY +WL +  GN
Sbjct: 191 APYLLMTLPFCLASFGYHGNVPSLMKYYGKDPKTIVKCLVYGTLMALALYTIWLLATMGN 250

Query: 246 LPRADFAPVIQQGGNVDVLLKALGSVVESEKVSQAINAFSMAAILSSFIGVGLGVFDFLA 305
           +PR +F  + ++GGN+DVL++AL  V+ S  +   +  FS  A+ SSF+GV LG+FD+LA
Sbjct: 251 IPRPEFIGIAEKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLA 310

Query: 306 DLFQFSNCKQGRTKTWLVTFLPPLILSLLFPFGFIIAIGYAGAAATIWACIIPVLLARKS 365
           DLF F +   GR KT L+TF PP++  LLFP GF+ AIGYAG AATIWA I+P LLAR S
Sbjct: 311 DLFGFDDSAVGRLKTALLTFAPPVVGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARAS 370

Query: 366 RTLANGAQGFVVPGGNLALGLVLIFGVLTAVFHMMAMANLLPAFK 410
           R    G+  F V GG   + L+L+FGV  A+ H+++  NLLP ++
Sbjct: 371 RK-RFGSPKFRVWGGKPMIALILVFGVGNALVHILSSFNLLPVYQ 414