Pairwise Alignments

Query, 313 a.a., universal stress protein from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., Universal stress protein UspA and related nucleotide-binding proteins from Enterobacter asburiae PDN3

 Score =  104 bits (260), Expect = 2e-27
 Identities = 82/318 (25%), Positives = 150/318 (47%), Gaps = 16/318 (5%)

Query: 1   MKKFKNILFATQGLPGHSDALEQAIQLAYNNRGQLAGLIAFPAFPADLQRYQEPYEQSYL 60
           M K++N+L A         AL +A+ L     G++   +    F  ++     P E++ +
Sbjct: 1   MAKYQNMLVAIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTTLLSPDERTAM 60

Query: 61  N--TLMETVEACRSQHHIHKDE-VPFPLMVEHSEQPAVAIIKSALNHHIDLLIKEAEPMT 117
               + +     R Q   + +  VP  + V    +P  AII+  +    DLL+K A    
Sbjct: 61  RQGVISQRTAWIREQAKYYLEAGVPIDIKVVWHNRPFEAIIQEIVAGGHDLLLKMAHQHD 120

Query: 118 HSQQG-FKALDMTLLRKCPCPVWLHRPLAKPKANRRVAVAIDPITTTEQQKALALRLLEL 176
             +   F   D  LLRKCPCPVW+ +    P+  + V VA++  +  +   +L  +L++ 
Sbjct: 121 KLESVIFTPTDWHLLRKCPCPVWMVKDQPWPEGGKAV-VAVNLASEEDYHNSLNEKLVKE 179

Query: 177 SRSIANTCD-SRLHIVSCWEYYLENYLHDQVWIQVEQQQIAEEIAQAKIR--HEQALRQL 233
           +  +A+  + + +H+V  +     N       I +E  +    +    IR  H  A++ L
Sbjct: 180 TIQLADQVNHTEVHLVGAYPVTPIN-------IAIELPEFDPSVYNDAIRGQHLLAMKAL 232

Query: 234 IDESGITGELVIHHLHGKPDELIPEWVTQENIDILVMGTLARTGIAGFVIGNTAENIVQS 293
             +  I  E + H   G P+E+IP+        I+V+GT+ RTGI+   +GNTAE ++  
Sbjct: 233 RQKFSID-EKMTHVEKGLPEEVIPDLAEHLQAGIVVLGTIGRTGISAAFLGNTAEQVIDH 291

Query: 294 IECSLVALKPEGFVSPIK 311
           + C L+ +KP+ + +P++
Sbjct: 292 LRCDLLVIKPDEYQTPVE 309