Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., hydrogenase 4 subunit B from Rhodanobacter sp000427505 FW510-R12

 Score =  157 bits (398), Expect = 2e-42
 Identities = 143/482 (29%), Positives = 229/482 (47%), Gaps = 41/482 (8%)

Query: 54  DLNLSFRLDGLSFLFASLITGIGALIQIYALAYMK--EKAARFSFHLYLTLFMLAMLGVV 111
           D+    RLD LS  F  L+   GA I I+A  Y +  E  A     L   +F+ +M  VV
Sbjct: 80  DMPFHVRLDALSGFFLLLLGTAGAGISIFAAGYFRHGEGTAPGLLCLQYHVFLASMALVV 139

Query: 112 VSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILLGLM 171
           ++D+  L  + WE   ++SY L+   H  P  ++     LL+   G LAL   L+  G++
Sbjct: 140 LADDAYLFMVAWETMALSSYFLVTTQHRIPEIQRAGFLYLLMAHVGALAL---LLCFGVL 196

Query: 172 ANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNA-MAAPTPVSAY 230
                +              W   + +L L G   K+   P H WLP A  AAP+PVSA 
Sbjct: 197 HGGSWLMTFDSMRAATLSPAWAAAAFLLALFGFGAKAGLVPLHVWLPEAHPAAPSPVSAM 256

Query: 231 LHSATMVKAGIYLLARLS-PIYASSDFWFYCLTI-VGAVTALWCALLAFKQTDLKLMLAY 288
           + S  M+K  +Y + R+S  +  +  +W+  LT+ VG VTAL+ A+ A  QTD+K +LAY
Sbjct: 257 M-SGLMLKVAVYGMLRISFDLLHAGPWWWGMLTLTVGLVTALFGAVFAAVQTDMKRLLAY 315

Query: 289 STNVALGKLTLLLGLG-----------TEVALTAAVLFIFAHSFYKAALFMVVGNIDKAT 337
           S+   +G +   LGL              +AL AA+L    H+ +K+ LF+  G++  AT
Sbjct: 316 SSIENIGLIFAALGLALLCYAFDMRLLAALALAAALLHALNHALFKSLLFLATGSVLHAT 375

Query: 338 GTREREKLGNLKSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYM---YKSSVESGIAWIS 394
             R   KLG L   +      A++  LS +G+ P+ GF+S+  +   + S+     A+I+
Sbjct: 376 RERSLGKLGGLIRRMPWVATLALVGTLSLAGLPPLNGFVSEWLLLQAFLSTPSIPHAFIN 435

Query: 395 LVLLLINALMVALAIAL---LYKPFFGQATKESESHPPKAIEQKKSLWLPAMG---LAIA 448
           +++ L  A +VAL  AL   +   F+G      +   P  ++   + WL  +G   LA+ 
Sbjct: 436 MIVPL-GAAVVALTAALAGYVMVKFYG-VIFLGQPREPSLMQAHDAGWLERVGLAWLALG 493

Query: 449 SFLLPVF---ALDWIN--QHLVIPAVMAMDP-----NSVPQAAKLWQGFNIPLALSGITL 498
             L+ VF   ALD I      ++  V+   P       V QA   + G  + L ++G+  
Sbjct: 494 CILIGVFPQAALDAIAGVTQTLLGTVIQRGPAPWWIAPVAQAQASYNGLWLLLGMAGVIA 553

Query: 499 VL 500
           ++
Sbjct: 554 MM 555



 Score = 25.8 bits (55), Expect = 0.009
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 16/84 (19%)

Query: 590 VAIALALIASALLCVLSTSRLLSVLALGMAGFMTTLVFMIYSAPDVAKTLLLVETLMVVF 649
           + +  A +  ALLC     RLL+ LAL  A     L+  +  A  + K+LL + T  V+ 
Sbjct: 321 IGLIFAALGLALLCYAFDMRLLAALALAAA-----LLHALNHA--LFKSLLFLATGSVLH 373

Query: 650 VVL---------LMRHVPYLSTVA 664
                       L+R +P+++T+A
Sbjct: 374 ATRERSLGKLGGLIRRMPWVATLA 397