Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 973 a.a., monovalent cation/H+ antiporter subunit A from Pseudomonas simiae WCS417

 Score =  475 bits (1222), Expect = e-138
 Identities = 307/901 (34%), Positives = 464/901 (51%), Gaps = 82/901 (9%)

Query: 49  WVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFMLAML 108
           W+P L LN   R+DG ++LF+ L+ GIG L+ +YA  YM        F  +   FM AML
Sbjct: 62  WLPSLGLNFVLRMDGFAWLFSMLVLGIGTLVSLYARYYMSPDDPVPRFFAFFLAFMGAML 121

Query: 109 GVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILL 168
           G+V+S N++ +  FWELT++ S+LLIG+ H +  +R+ A  +L+VTGAGGL LLAG++LL
Sbjct: 122 GLVISGNLIQIVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGGLCLLAGVMLL 181

Query: 169 GLMANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPTPVS 228
           G +  SY +  ++   D I  H  +   L LVL+GA +KSAQFPFHFWLP+AMAAPTPVS
Sbjct: 182 GHIVGSYDLDRVLAAGDQIRAHSLYPVMLALVLIGALSKSAQFPFHFWLPHAMAAPTPVS 241

Query: 229 AYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLAY 288
           AYLHSATMVKAG++LLARL P  + S+ WF+ +   GA+T L  A  A  Q DLK +LAY
Sbjct: 242 AYLHSATMVKAGVFLLARLWPSLSGSEEWFWIVGGAGALTLLLGAYCAMFQNDLKGLLAY 301

Query: 289 STNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGNL 348
           ST   LG +TLLLGL + +A  AAV  I  H+ +KA+LFM  G ID  +GTR+  KL  L
Sbjct: 302 STISHLGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAGIIDHESGTRDIRKLSGL 361

Query: 349 KSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSVE-SGIAWISLVLLLINALM--- 404
             ++  +   A++A+ S +GV  + GFLSKE  +  +V  S  AW+ + L LI  +    
Sbjct: 362 VKLIPFTATLAMVASASMAGVPLLNGFLSKEMFFAETVFISSTAWVEIALPLIATIAGTF 421

Query: 405 -VALAIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALDWINQH 463
            VA A+      FFG         P    E  + +  P   L     L+ +F    +   
Sbjct: 422 SVAYALRFTVDVFFGPPATHLPHTPH---EPPRWMRAPVELLVFTCLLVGIFPAQVVGSI 478

Query: 464 LVIPAVMAMDPNSVPQAAKLWQGFNIPLALSGITLVLGGVLYLNYATLVTWLTRLVKPLP 523
           L   A+  +       +  +W G+N P+ +S + +  G VLYL           L K L 
Sbjct: 479 LAAAALPVVGGELPEYSLAIWHGWNAPMIMSLVAMSGGVVLYL----------LLRKQLK 528

Query: 524 KAEQMFDAVLAYLATLASWQTQMLQ--------QKRSSGYML---LFFAVLALILIYQPL 572
           +    +  +++Y      ++  ++         +KR S   L   LF  VL  ++     
Sbjct: 529 RGRFKYPPIISYFNGKRGFERSLVVMMRGVRKIEKRISTKRLQTQLFLLVLVAVIGGMIP 588

Query: 573 PLPATFS--------ASLFDVHFYEVAIALALIASALLCVLSTSRLLSVLALGMAGFMTT 624
            L +  S         S+  V  + +AIA AL A+         RL ++  + + G MT 
Sbjct: 589 MLNSGLSWGDRPKIPGSIVFVTLWLLAIACALGAA---WQAKYHRLAALTMVSVCGLMTC 645

Query: 625 LVFMIYSAPDVAKTLLLVETLMVVFVVLLMRHVPY-------LSTVARHSVPRRTLNAVI 677
           + F+ +SAPD+A T L+VE +  V ++L +R +P        L    R +  RR  + ++
Sbjct: 646 VTFVWFSAPDLALTQLVVEVVTTVLILLGLRWLPRRIEEVSPLPNTLRKARIRRVRDFLL 705

Query: 678 ASVIGASVTLILLNITAHPIDTTLSDYFAQQSVPGGHGRNIVNVILVDFRAFDTLGEVIV 737
           ++V+G  + L+   +        +S ++  +++P G G N+VNV+LVDFR FDTLGE+ V
Sbjct: 706 STVVGGGMALLSYAMLTRQTPNDISSFYLSRALPEGGGSNVVNVMLVDFRGFDTLGEITV 765

Query: 738 VVMASLVAISLL-----------------------------PKRTEQPQKIHSLIFATTA 768
           +   +L   +LL                             P++         ++ A   
Sbjct: 766 LGAVALTVYALLRRFRPSKESMQLPAQQRQLAPDVATDLVNPRQASDTALGFMMVPAVLV 825

Query: 769 HIVTALMLMFSLYLLLRGHNAPGGGFIGALIAVIGFSLLLFAESPQYVRDRLHFSPLNIA 828
            ++  + L+ S YL +RGHN PGGGF+  L+  + F L       Q+V  ++   P+   
Sbjct: 826 RLLLPIALVVSFYLFMRGHNQPGGGFVAGLVMSVAFILQYMVAGTQWVEAQMSLRPMRWM 885

Query: 829 LFGILLSFMAGAMSVAVGLPFLTGLWWKEILP------LGTPLLFDVGIYLAIIGGVMSM 882
            FG+  + + G  ++  G PFLT   W   LP      + + L FDVG+Y  ++G  + M
Sbjct: 886 GFGLFSATLTGLGALFAGYPFLTTHTWHFSLPVLGDIHIASALFFDVGVYAMVVGSTLLM 945

Query: 883 L 883
           L
Sbjct: 946 L 946