Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., NADH-quinone oxidoreductase subunit L from Pseudomonas simiae WCS417

 Score =  207 bits (527), Expect = 2e-57
 Identities = 156/475 (32%), Positives = 244/475 (51%), Gaps = 24/475 (5%)

Query: 45  WQVTWVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFM 104
           WQ   V G   N +  +DGLS     ++ G+G LI ++A  YM+ +A    F  Y  LF+
Sbjct: 67  WQWMSVEGFKPNFALYVDGLSITMLGVVVGVGFLIHLFASWYMRGEAGYSRFFSYTNLFI 126

Query: 105 LAMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAG 164
            +ML +V+ DN+L L+  WE   + SYLLIGF +    +   AL++ +VT  G + +  G
Sbjct: 127 ASMLFLVLGDNLLFLYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDVFMAIG 186

Query: 165 LILLGLMANSYQISVIIEHADHIAQHP--WFMPSLILVLLGAFTKSAQFPFHFWLPNAMA 222
           L +L   A +  I  ++  A    Q    W   + +++L GA  KSAQ P   WL +AMA
Sbjct: 187 LFILFQQAGTLNIQELLVLAPQKFQVGDFWITLATLMLLGGAVGKSAQLPLQTWLADAMA 246

Query: 223 APTPVSAYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDL 282
            PTPVSA +H+ATMV AG+YL+AR   ++  +    + + IVG VT +     A  QTD+
Sbjct: 247 GPTPVSALIHAATMVTAGVYLIARTHGLFTLAPDILHLVGIVGGVTLVLAGFAALVQTDI 306

Query: 283 KLMLAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTRER 342
           K +LAYST   +G + L LG+G   A  AA+  +  H+F+KA LF+  G +  A    + 
Sbjct: 307 KRILAYSTMSQIGYMFLALGVG---AWDAAIFHLMTHAFFKALLFLASGAVIVACHHEQN 363

Query: 343 -EKLGNLKSVLLLSLIAAVIAALSKSGVAPML--GFLSKEYMYKSSVESGIAWISLVLLL 399
             K+G L   L L+  + ++   + + + P++  GF SK+ +   +  SG   + L   L
Sbjct: 364 IFKMGGLWKKLPLAYASFIVGGAALAAL-PLVTAGFYSKDEILWEAFASGNQNL-LYAGL 421

Query: 400 INALMVAL-AIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALD 458
           + A M +L    L++  F G+A  ++E+H    I    S WLP   L I S    V A+ 
Sbjct: 422 VGAFMTSLYTFRLIFITFHGEA--KTEAHAGHGI----SHWLPLSVLIILSTF--VGAMI 473

Query: 459 WINQHLVIPAVMAMDPNSVPQAAKLWQGFNIPLALSGITLVLGGVLYLNYATLVT 513
               H V+P  +         + ++  G    +A++GI  +L  +L+L     VT
Sbjct: 474 TPPLHGVLPQSVGHAGGEAQHSLEIASG---AIAIAGI--LLAALLFLGKRRFVT 523