Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 982 a.a., Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B from Variovorax sp. SCN45

 Score =  469 bits (1207), Expect = e-136
 Identities = 304/895 (33%), Positives = 473/895 (52%), Gaps = 63/895 (7%)

Query: 46  QVTWVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFML 105
           ++ W+P L LNL FR+DG ++LF  L+ GIGAL+ +YA  YM        F  +   FM 
Sbjct: 59  EIQWLPALGLNLVFRMDGFAWLFCMLVLGIGALVVLYARYYMSASDPVPRFFSFFLAFMG 118

Query: 106 AMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGL 165
           AM+GVV+S N++ + +FWELT++ S+LLIG+ H +  +R+ A  +L VTGAGGL LLAG+
Sbjct: 119 AMMGVVLSGNLIQMVLFWELTSLFSFLLIGYWHHRRDARRGARMALTVTGAGGLCLLAGV 178

Query: 166 ILLGLMANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPT 225
           ++LG +  SY++ V++   D I  H  +  +L+L+LLGAFTKSAQFPFHFWLP AMAAPT
Sbjct: 179 LVLGRIVGSYELDVVLASGDLIRAHALYPVALVLILLGAFTKSAQFPFHFWLPRAMAAPT 238

Query: 226 PVSAYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLM 285
           PVSAYLHSATMVK G++L+ARL P+ + ++ WF+ +   GA+T L    +A  Q DLK +
Sbjct: 239 PVSAYLHSATMVKLGVFLMARLWPVLSGTEQWFWLVGGAGAITLLLGGFIAMFQRDLKAL 298

Query: 286 LAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKL 345
           LAYST   LG +TLLLGL + +A  AAV  +  H+ +KA+LFM  G ID  TGTR+  KL
Sbjct: 299 LAYSTISHLGLITLLLGLNSPLAAVAAVFHVMNHATFKASLFMAAGIIDHETGTRDIRKL 358

Query: 346 GNLKSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSV-ESGIAWISLVLLLINAL- 403
             L  ++ ++   A+IA+ S +GV  + GFLSKE  +  +V      W+   L +I  + 
Sbjct: 359 SGLMRLMPITGTLAIIASASMAGVPLLNGFLSKEMFFAETVFIQATPWVDFSLPVIATIA 418

Query: 404 ---MVALAIALLYKPFFG-QATKESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALDW 459
               VA +   ++  FFG     E   HP    E    + +P   L +   ++ V A  W
Sbjct: 419 GIFSVAYSARFVFDVFFGPPCGDEVPKHPH---EPPHWMRVPVELLVLLCLVVGV-APAW 474

Query: 460 INQHLVIPAVMAMDPNSVPQ-AAKLWQGFNIPLALSGITLVLGGVLYL----NYATLVTW 514
               ++  A   +   ++P+ +  +W GFN+PL +S + L  G  LYL      A     
Sbjct: 475 SVGPMLAAAATPVVGGTLPEYSLAVWHGFNLPLLMSFVALAGGAALYLLQRRRRARGGLE 534

Query: 515 LTRLVKPLPKAEQMFDAVLAYLATLASWQTQMLQQKRSSGYMLLFFAVLALILIYQPLPL 574
            T L+      + +F+ ++A L+       ++   KR   + LL   V+A+      L L
Sbjct: 535 NTPLLHRF-DGQVIFEHLIALLSEAGRRSRRLFGTKRMQ-WQLLLLVVVAVAGATAALSL 592

Query: 575 ----PATFSASLFDVHFYEVAIALALIASALLCVLSTSRLLSVLALGMAGFMTTLVFMIY 630
               P T     F   F    +     A A        RL +++    AG ++ + ++ +
Sbjct: 593 TPAAPGTRELLPFSPMFAMTWLIGGTCAVAAAWQAKFHRLAALMLAAGAGLVSCVTYIWF 652

Query: 631 SAPDVAKTLLLVETLMVVFVVLLMRHVPYLS----TVARHSV---PRRTLNAVIASVIGA 683
           SAPD+A T L+VE +  V ++L +R +P  S      AR  +    RR  + +IA++ G+
Sbjct: 653 SAPDLALTQLVVEAVTTVLILLGLRWLPMRSKDVVQPARARLRPWGRRGRDLLIAAIAGS 712

Query: 684 SVTLILLNITAHPIDTTLSDYFAQQSVPGGHGRNIVNVILVDFRAFDTLGEVIVVVMASL 743
            +  +   +       ++S +F ++++  G G N+VNV+LVDFR FDT GE+ V+ + +L
Sbjct: 713 GMAALAWAMMTREFPQSISPFFLERALTEGGGTNVVNVMLVDFRGFDTFGEITVLGIVAL 772

Query: 744 VAISLL-----------------------------PKRTEQPQKIHSLIFATTAHIVTAL 774
              +LL                             P+R +     + ++ A    ++  +
Sbjct: 773 TVYALLRRFRPAIESMALPIQQRLQADDGSSDLLNPRRAKDTAVGYLMVPAVLVRLLLPI 832

Query: 775 MLMFSLYLLLRGHNAPGGGFIGALIAVIGFSLLLFAESPQYVRDRLHFSPLNIALFGILL 834
            ++ S+Y  +RGHNAPGGGF+  L+  +   L       ++V + L   P      G+LL
Sbjct: 833 SVLVSVYFFMRGHNAPGGGFVAGLVMSVALVLQFIVSGTEWVEEHLRIYPRRWIAIGLLL 892

Query: 835 SFMAGAMSVAVGLPFLTGLWWKEILP------LGTPLLFDVGIYLAIIGGVMSML 883
           +   G  +V  G PFLT       LP      + + L FD+G++  ++G  M +L
Sbjct: 893 ALATGGGAVFFGYPFLTTHTAHLHLPVLGEVHVPSALFFDIGVFALVLGATMLIL 947