Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., NADH dehydrogenase subunit L from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  210 bits (535), Expect = 2e-58
 Identities = 161/506 (31%), Positives = 254/506 (50%), Gaps = 40/506 (7%)

Query: 26  LPILLFGWVFYWHQT----GGNAWQVTW----VPGLDLNLSFRLDGLSFLFASLITGIGA 77
           L  ++  WV +        GG+  QV W    V G   N +  LDGLS     ++ G+G 
Sbjct: 40  LSAIVTAWVIWQFNVAPPEGGHYSQVLWRWMDVDGFQPNFALYLDGLSVTMLGVVVGVGF 99

Query: 78  LIQIYALAYMKEKAARFSFHLYLTLFMLAMLGVVVSDNILLLFIFWELTTITSYLLIGFN 137
           LI ++A  YM+ +A    F  Y  LF+ +ML +++ DN+L ++  WE   + SYLLIGF 
Sbjct: 100 LIHLFASWYMRGEAGYSRFFSYTNLFIASMLFLILGDNLLFIYFGWEGVGLCSYLLIGFY 159

Query: 138 HDKPVSRKNALQSLLVTGAGGLALLAGLILLGLMANSYQISVIIEHA-DHIAQHP-WFMP 195
           +    +   AL++ +VT  G + +  GL +L     +  +  ++  A +H      W + 
Sbjct: 160 YSNRNNGNAALKAFIVTRIGDVFMAIGLFILFQQLGTLNVQELLVRAPEHFKVGDFWIVL 219

Query: 196 SLILVLLGAFTKSAQFPFHFWLPNAMAAPTPVSAYLHSATMVKAGIYLLARLSPIYASSD 255
           + +++L GA  KSAQ P   WL +AMA PTPVSA +H+ATMV AG+YL+AR   ++A + 
Sbjct: 220 ATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFALAP 279

Query: 256 FWFYCLTIVGAVTALWCALLAFKQTDLKLMLAYSTNVALGKLTLLLGLGTEVALTAAVLF 315
              + + IVG VT +     A  QTD+K +LAYST   +G + L LG+G   A   A+  
Sbjct: 280 DILHLVGIVGGVTLVLAGFAALVQTDIKRILAYSTMSQIGYMFLALGVG---AWEGAIFH 336

Query: 316 IFAHSFYKAALFMVVGNIDKATGTRER-EKLGNLKSVLLLSLIAAVIAALSKSGVAPML- 373
           +  H+F+KA LF+  G +  A    +   K+G L   L L+  + ++   + S + P+L 
Sbjct: 337 LMTHAFFKALLFLASGAVIVACHHEQNIFKMGGLWKKLPLAYASFIVGGAALSAL-PLLT 395

Query: 374 -GFLSKEYMYKSSVESGIAWISLVLLLINALMVAL-AIALLYKPFFGQATKESESHPPKA 431
            GF SK+ +   +  SG   + L   L+ A M +L    L++  F G+A  ++E+H    
Sbjct: 396 AGFYSKDEILWEAFASGNNGL-LYAGLVGAFMTSLYTFRLIFIAFHGEA--KTEAHAGHG 452

Query: 432 IEQKKSLWLPAMGLAIASFLLPVFALDWINQHLVIPAVMAMDPNSVPQA-AKLWQGFNI- 489
           I      WLP   L + S  +           L+ P +  + P SV  A  +      I 
Sbjct: 453 IAH----WLPLSVLIVLSTFIGA---------LITPPLAGVLPQSVGHAGGEAKHSLEIA 499

Query: 490 --PLALSGITLVLGGVLYLNYATLVT 513
              +AL+GI  +L  +L+L    L T
Sbjct: 500 SGAIALAGI--LLAALLFLGKRRLAT 523