Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Sphingobium sp. HT1-2

 Score =  199 bits (505), Expect = 6e-55
 Identities = 132/405 (32%), Positives = 215/405 (53%), Gaps = 23/405 (5%)

Query: 48  TWVPG--LDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFML 105
           TW+     D   + R+D ++ +   +IT + +L+ +Y+  YM E+  +  F  YL+LF  
Sbjct: 64  TWIESGSFDAQWALRVDTMTAVMLVVITSVSSLVHLYSWGYMDEEPDQPRFFAYLSLFTF 123

Query: 106 AMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGL 165
           AML +V ++N+L +F  WE   + SYLLIGF   KP +   A+++ +V   G L  + G+
Sbjct: 124 AMLMLVTANNLLQMFFGWEGVGLASYLLIGFWFRKPSANAAAIKAFVVNRVGDLGFMMGI 183

Query: 166 ILLGLMANSYQISVIIEHADHIAQ-------HPWFMPSLILVLL--GAFTKSAQFPFHFW 216
               L+ N+  I  I+E A  +A        H +   +++ +LL  GA  KSAQ   H W
Sbjct: 184 FGTYLVFNTISIPEILEMAPSMAGSTIGFLGHRFDTMTVLCLLLFIGAMGKSAQLGLHTW 243

Query: 217 LPNAMAAPTPVSAYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLA 276
           LP+AM  PTPVSA +H+ATMV AG++++ RLSP++  S      +T VGA T L+ A + 
Sbjct: 244 LPDAMEGPTPVSALIHAATMVTAGVFMVCRLSPMFEMSPTALTVVTYVGAATCLFAATVG 303

Query: 277 FKQTDLKLMLAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKA 336
             QTD+K ++AYST   LG +    G G   A  AA+  +F H+F+KA LF+  G++  A
Sbjct: 304 TVQTDIKRVIAYSTCSQLGYMFFAAGCG---AYGAAMFHLFTHAFFKALLFLGAGSVIHA 360

Query: 337 T-GTREREKLGNLKSVLLLSLIAAVIAALSKSGVAPML------GFLSKEYMYKSSVESG 389
               ++    G L+  + ++     +  L+ +GV   L      GF SK+ + +++  SG
Sbjct: 361 MHHEQDMRYYGGLRKKIPVTFWTMTLGTLAITGVGLPLVGVGFAGFYSKDGILEAAFASG 420

Query: 390 IAWISLVLLLINALMVA--LAIALLYKPFFGQATKESESHPPKAI 432
            A I    + + A ++    +  L++  FFG+       H   A+
Sbjct: 421 GAGIGAYYVGVFAALLTSFYSWRLVFLTFFGKPRWTQSEHIQHAL 465