Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., NADH:ubiquinone oxidoreductase, membrane subunit L from Pseudomonas putida KT2440

 Score =  210 bits (534), Expect = 2e-58
 Identities = 156/477 (32%), Positives = 248/477 (51%), Gaps = 28/477 (5%)

Query: 45  WQVTWVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFM 104
           WQ   V G   N +  LDGLS     ++TG+G LI ++A  YM+ +A    F  Y  LF+
Sbjct: 67  WQWMSVDGFAPNFTLYLDGLSVTMLGVVTGVGFLIHLFASWYMRGEAGYSRFFSYTNLFI 126

Query: 105 LAMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAG 164
            +ML +++ DN+L ++  WE   + SYLLIGF +    +   AL++ +VT  G + +  G
Sbjct: 127 ASMLFLILGDNLLFIYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDVFMAIG 186

Query: 165 LILLGLMANSYQISVIIEHADHIAQ--HPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMA 222
           L +L     +  +  ++  A    Q    W + + +++L GA  KSAQ P   WL +AMA
Sbjct: 187 LFILFAQLGTLNVQELLVLAPQKFQAGDTWMVLATLMLLGGAVGKSAQLPLQTWLADAMA 246

Query: 223 APTPVSAYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDL 282
            PTPVSA +H+ATMV AG+YL+AR + ++  +    + + +VG +T +     A  QTD+
Sbjct: 247 GPTPVSALIHAATMVTAGVYLIARTNGLFLLAPDILHLVGVVGGLTLVLAGFAALVQTDI 306

Query: 283 KLMLAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTRER 342
           K +LAYST   +G + L LG+G   A  AA+  +  H+F+KA LF+  G +  A    + 
Sbjct: 307 KRILAYSTMSQIGYMFLALGVG---AWDAAIFHLMTHAFFKALLFLASGAVIVACHHEQN 363

Query: 343 -EKLGNLKSVLLLSLIAAVI--AALSKSGVAPMLGFLSKEYMYKSSVESGIAWISLVLLL 399
             K+G L   L L+  + V+  AAL+   +   +GF SK+ +   +  SG   + L   L
Sbjct: 364 IFKMGGLWKKLPLAYASFVVGGAALAALPIV-TVGFYSKDEILWEAFASGNTGL-LYAGL 421

Query: 400 INALMVAL-AIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALD 458
           + A M +L    L++  F G+A  ++E+H    I    S WLP +G+ I   +L  F   
Sbjct: 422 VGAFMTSLYTFRLIFIAFHGEA--KTEAHAGHGI----SHWLP-LGVLI---VLSTFVGA 471

Query: 459 WINQHL--VIPAVMAMDPNSVPQAAKLWQGFNIPLALSGITLVLGGVLYLNYATLVT 513
           WI   L  V+P            A ++  G    +A++GI  +L  +L+L     V+
Sbjct: 472 WITPPLAGVLPESAGHAGGEAKHALEITSG---AIAIAGI--LLAALLFLGKRRFVS 523