Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 971 a.a., putative K(+)/H(+) antiporter subunit A/B from Pseudomonas putida KT2440

 Score =  480 bits (1236), Expect = e-139
 Identities = 318/896 (35%), Positives = 483/896 (53%), Gaps = 72/896 (8%)

Query: 49  WVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFMLAML 108
           W+P L +NL  R+DG ++LF+ L+ GIGAL+ +YA  YM  +     F  +   FM AML
Sbjct: 62  WLPSLGMNLVLRMDGFAWLFSLLVLGIGALVSLYARYYMSPQDPVPRFFAFFLAFMGAML 121

Query: 109 GVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILL 168
           G+V+S N++ L  FWELT++ S+LLIG+ H +  +R+ A  +L+VTGAGGL LL G +LL
Sbjct: 122 GLVISGNLIQLVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGGLCLLVGALLL 181

Query: 169 GLMANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPTPVS 228
           G +  SY +  ++     I QH  +   L L+L+GA TKSAQFPF FWLP+AMAAPTPVS
Sbjct: 182 GHVVGSYDLDKVLAAGHIIRQHALYPVLLPLILIGALTKSAQFPFQFWLPHAMAAPTPVS 241

Query: 229 AYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLAY 288
           AYLHSATMVKAG++LLARL P+ + S+ WF+ +   GA+T L  A  A  Q DLK +LAY
Sbjct: 242 AYLHSATMVKAGVFLLARLWPVLSGSEEWFWIVGGAGALTLLLGAFAAMFQNDLKGLLAY 301

Query: 289 STNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGNL 348
           ST   LG +TLLLGL + +A  AAV  I  H+ +KA+LFM  G ID  +GTR+  +L  L
Sbjct: 302 STISHLGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAGIIDHESGTRDIRRLSGL 361

Query: 349 KSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSV-ESGIAWISLVLLLINAL---- 403
             ++  +   A++A+ S +GV  M GFLSKE  +  +V  S  AW+   L +I  L    
Sbjct: 362 IRLVPYTATLAMVASASMAGVPLMNGFLSKEMFFAETVFISSTAWVEATLPVIATLAGTF 421

Query: 404 MVALAIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALDWINQH 463
            VA A+      FFG  T +   H P   E  + +  P   L +   ++ +F    +   
Sbjct: 422 SVAYALRFTVDVFFG-PTAQDLPHTPH--EPPRWMRAPVELLVLTCLVVGIFPTQSVGPL 478

Query: 464 LVIPAVMAMDPNSVPQAAKLWQGFNIPLALSGITLVLGGVLYLNYATLVTWLTRLVK-PL 522
           L   A+  +       +  +W G+N P+ +S + +  G VLYL    L+    RL + P 
Sbjct: 479 LAAAALPVVGGTLPEYSLAIWHGWNAPMIMSLVAMSGGIVLYL----LLRKQLRLGRFPY 534

Query: 523 P------KAEQMFDAVLAYLATLASWQTQMLQQKR--SSGYMLLFFAVLALI--LIYQPL 572
           P        +++F+    +L  LA    ++L  +R  S  +ML+F A LA +  ++Y  L
Sbjct: 535 PPVIERFNGKRLFEHGQVHLMLLARRIERVLTTRRLQSQLFMLVFAAFLAGLTPMLYSGL 594

Query: 573 ---PLPATFSASLFDVHFYEVAIALALIASALLCVLSTSRLLSVLALGMAGFMTTLVFMI 629
                P    + +F V  + +AIA A+ A+         RL +++ + + G MT + F+ 
Sbjct: 595 SWGDRPKIPGSGVF-VALWLIAIACAIGAA---YQAKYHRLAALIMVSVCGLMTCITFVW 650

Query: 630 YSAPDVAKTLLLVETLMVVFVVLLMRHVPY-------LSTVARHSVPRRTLNAVIASVIG 682
           +SAPD+A T L+VE +  V ++L +R +P        L      +  RR  + ++A ++G
Sbjct: 651 FSAPDLALTQLVVEVVTTVLILLGLRWLPRRIEGVSPLPGSLERARLRRLRDLLLAVLVG 710

Query: 683 ASVTLILLNITAHPIDTTLSDYFAQQSVPGGHGRNIVNVILVDFRAFDTLGEVIVVVMAS 742
             + ++   +   P    +S ++  +++P G G N+VNV+LVDFR FDTLGE+ V+V  +
Sbjct: 711 GGMAVLSYAMLTRPTPNDISSFYLSRALPQGGGTNVVNVMLVDFRGFDTLGEITVLVAVA 770

Query: 743 LVAISLL-----PKRTEQ---------PQKIHSLIF---------------ATTAHIVTA 773
           L   +LL     PK + Q         P  +  LI                A    ++  
Sbjct: 771 LTVFALLRRFRPPKESMQLPAQQRQLAPDVVTDLINPRHATDTALGFMMVPAALVRLLLP 830

Query: 774 LMLMFSLYLLLRGHNAPGGGFIGALIAVIGFSLLLFAESPQYVRDRLHFSPLNIALFGIL 833
           + L+ S+YL +RGHN PGGGF+  L+  + F L       Q+V  ++   PL     G+L
Sbjct: 831 IALLVSMYLFMRGHNQPGGGFVAGLVMSVAFILQYMVAGTQWVEAQMSLRPLRWMGTGLL 890

Query: 834 LSFMAGAMSVAVGLPFLTGLWWKEILPL------GTPLLFDVGIYLAIIGGVMSML 883
            + + G  ++ +G PFLT       LPL       + L FD+G+Y  ++G  + +L
Sbjct: 891 CATLTGVGAMLLGYPFLTTHTAHLHLPLLGDVHVASALFFDIGVYTVVVGSTLLIL 946