Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 971 a.a., monovalent cation/H+ antiporter subunit A from Pseudomonas sp. SVBP6

 Score =  470 bits (1209), Expect = e-136
 Identities = 309/892 (34%), Positives = 475/892 (53%), Gaps = 64/892 (7%)

Query: 49  WVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFMLAML 108
           W+P L LNL  R+DG ++LF+ L+ GIG L+ +YA  YM  +     F  +   FM AML
Sbjct: 62  WLPSLGLNLVLRMDGFAWLFSLLVLGIGTLVSLYARYYMSPQDPVPRFFAFFLAFMGAML 121

Query: 109 GVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILL 168
           G+V+S N++ +  FWELT++ S+LLIG+ H +  +R+ A  +L+VTGAGGL LLAG++LL
Sbjct: 122 GLVISGNLIQIVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGGLCLLAGVLLL 181

Query: 169 GLMANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPTPVS 228
           G +  SY +  ++   + I  H  +   L L+LLGA +KSAQFPFHFWLP+AMAAPTPVS
Sbjct: 182 GHVVGSYDLDKVLAAGEQIRHHTLYPVLLPLILLGALSKSAQFPFHFWLPHAMAAPTPVS 241

Query: 229 AYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLAY 288
           AYLHSATMVKAG++LLARL P  + ++ WF+ ++  GA T +  A  A  Q DLK +LAY
Sbjct: 242 AYLHSATMVKAGVFLLARLWPALSGTEEWFWIVSGAGAATLVLGAFTAMFQNDLKGLLAY 301

Query: 289 STNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGNL 348
           ST   LG +TLLLGL + +A  AAV  I  H+ +KA+LFM  G ID  +GTR+  +L  L
Sbjct: 302 STISHLGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAGIIDHESGTRDIRRLSGL 361

Query: 349 KSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSV-ESGIAWISLVLLLINAL---- 403
             ++  +   A++A+ S +GV  + GFLSKE  +  +V  S  AW+   L +I  L    
Sbjct: 362 FRLIPFTATLAMVASASMAGVPLLNGFLSKEMFFAETVFISATAWVEAALPVIATLAGTF 421

Query: 404 MVALAIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALDWINQH 463
            VA A+      FFG    +    P    E  + +  P   L +   L+ +F    +   
Sbjct: 422 SVAYALRFTVDVFFGPPATDLPHTPH---EPPRWMRAPVELLVMTCLLVGIFPAQSVGPL 478

Query: 464 LVIPAVMAMDPNSVPQAAKLWQGFNIPLALSGITLVLGGVLYL---NYATLVTWLTRLVK 520
           L   A+  +       +  +W G+N PL +S I +  G VLYL   N   L  + +  + 
Sbjct: 479 LAAAALPVVGGTLPEYSLAIWHGWNAPLIMSLIAMSGGIVLYLLLRNQLKLGRFPSPPLI 538

Query: 521 PLPKAEQMFD--AVLAYLATLASWQTQMLQQKRSSGYMLLFFAVLA--LILIYQPL---P 573
                +++F+   VL   A     +    ++ +   +ML+  A+LA  L +++  L    
Sbjct: 539 ERFNGKRLFEHGQVLIMRAARRFERVFTTRRLQKQLFMLVLIALLAGLLPMLHSGLSWGD 598

Query: 574 LPATFSASLFDVHFYEVAIALALIASALLCVLSTSRLLSVLALGMAGFMTTLVFMIYSAP 633
            P    + +F V  + +AIA AL A+         RL ++  + + G MT + F+ +SAP
Sbjct: 599 RPKIPGSGVF-VMLWLIAIACALGAA---WQAKYHRLAALTMVSVCGLMTCITFVWFSAP 654

Query: 634 DVAKTLLLVETLMVVFVVLLMRHVPY-------LSTVARHSVPRRTLNAVIASVIGASVT 686
           D+A T L+VE +  V ++L +R +P        L      +  RR  + ++A  +G  + 
Sbjct: 655 DLALTQLVVEVVTTVLILLGLRWLPRRIEGVSPLPGTQERARLRRLRDLLLAIGVGGGMA 714

Query: 687 LILLNITAHPIDTTLSDYFAQQSVPGGHGRNIVNVILVDFRAFDTLGEVIVVVMASLVAI 746
           L+   +   P    +S ++  +++P G G N+VNV+LVDFR FDTLGE+ V+V  +L   
Sbjct: 715 LLSYAMLTRPTPNDISSFYLSRAMPEGGGSNVVNVMLVDFRGFDTLGEITVLVAVALAVF 774

Query: 747 SLL-----PKRTEQ---------PQKIHSLIF---------------ATTAHIVTALMLM 777
           +LL     PK + Q         P  +  L+                A    ++  + L+
Sbjct: 775 ALLRRFRPPKESMQLPAQQRLLAPDVVTDLVNPRHAADTALGFMMVPAALVRLLLPIALV 834

Query: 778 FSLYLLLRGHNAPGGGFIGALIAVIGFSLLLFAESPQYVRDRLHFSPLNIALFGILLSFM 837
            S+YL +RGHN PGGGF+  L+  + F L       Q+V  ++   PL     G+L + +
Sbjct: 835 VSMYLFMRGHNQPGGGFVAGLVMSVAFILQYMVAGTQWVEAQMSLRPLRWMGTGLLCATL 894

Query: 838 AGAMSVAVGLPFLTGLWWKEILP------LGTPLLFDVGIYLAIIGGVMSML 883
            G  ++ +G PFLT       LP      L + L FD+G++  ++G  + +L
Sbjct: 895 TGVGAMLLGYPFLTTHTAHLHLPLLGDTHLASALFFDIGVFTVVVGSTLLIL 946