Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 933 a.a., Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B from Pseudomonas sp. S08-1

 Score =  547 bits (1409), Expect = e-159
 Identities = 327/865 (37%), Positives = 496/865 (57%), Gaps = 34/865 (3%)

Query: 49  WVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFMLAML 108
           W+  +  NLS RLDGL+FLFA LI GIG L+ +YA  Y+ E+ A   F  YL LFM AML
Sbjct: 62  WLSQIGFNLSLRLDGLAFLFALLILGIGLLVILYARYYLSEREAIGRFFSYLLLFMGAML 121

Query: 109 GVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILL 168
           GVV+S+N+LL+  FWELT+++S+LLIGF   +  +RK A  +L VTG GGLALLAG++L+
Sbjct: 122 GVVLSENLLLMLTFWELTSLSSFLLIGFWSKRSDARKGARMALAVTGGGGLALLAGILLI 181

Query: 169 GLMANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPTPVS 228
           G +  S+++SV++  A+ I  H  +  +L+LVLLGAFTKSAQFPFHFWLP+AMAAPTPVS
Sbjct: 182 GHIVGSFELSVVLASAELIHAHALYPVALVLVLLGAFTKSAQFPFHFWLPHAMAAPTPVS 241

Query: 229 AYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLAY 288
           AYLHSATMVKAG++LLARL P  A SD WFY + + G  T L  A++A  Q DLK +LAY
Sbjct: 242 AYLHSATMVKAGVFLLARLYPALAGSDLWFYLVGLTGLATLLLGAVMALFQHDLKGLLAY 301

Query: 289 STNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGNL 348
           ST   LG + LLLG+ ++++  AAV  I  H+ +KA+LFM  G ID  TG+R+  ++  +
Sbjct: 302 STISHLGLIVLLLGMDSQLSNVAAVFHIINHATFKASLFMAAGIIDHETGSRDMRRINGM 361

Query: 349 KSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSVESGIA-----WISLVLLLINAL 403
              +  + + A++A+ + +GV  + GFLSKE  +  +++  +      W+   L  + A+
Sbjct: 362 WKYMPHTAVLAMVASSAMAGVPLLNGFLSKEMFFGETLQQALQGNYFNWLIPPLATLAAV 421

Query: 404 M-VALAIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALDWINQ 462
             VA ++  ++  FF          PP   E  + + +P   L     L+ +     +  
Sbjct: 422 FSVAYSLRFIHDVFFNGEPINLPKFPPH--EPPRYMKIPVEILVFLCLLVGMLPGYTVAP 479

Query: 463 HLVIPAVMAMDPNSVPQAAKLWQGFNIPLALSGITLVLGGVLYLNYATLVTWLTRLVKPL 522
            L + A  ++          +W GFN+PLA+S + LV G ++Y+    L     R  + L
Sbjct: 480 LLAVAAQASLGGALPAYDLAIWHGFNLPLAMSCLALVGGILVYVGRKPLF----RAYESL 535

Query: 523 PK--AEQMFDAVLAYLATLASWQTQMLQQKRSSGYMLLFFAVLALILIYQPLPLP-ATFS 579
           P+  A+++F+  +  L  LA W T  L+      Y+ L      +++     PLP  T  
Sbjct: 536 PEVDAKEVFEQQVQRLVALAGWITSRLENGSLQRYLALLLGSALVLVGVALAPLPQLTGE 595

Query: 580 ASLFDVHFYEVAIALALIASALL-CVLSTSRLLSVLALGMAGFMTTLVFMIYSAPDVAKT 638
             L  +  +     L L AS LL  +    RL+++L LG+ G +  L F  +SAPD+A+T
Sbjct: 596 RGLSPLDGFTALGMLVLAASGLLTAIFHRQRLVALLILGVGGMLVALAFARFSAPDLAQT 655

Query: 639 LLLVETLMVVFVVLLMRHVPYLSTVARHSVPRRTLNAVIASVIGASVTLILLNITAHPID 698
            L+VE + ++ ++L + ++P   T    S+PR   + ++A   GA V ++   +   P D
Sbjct: 656 QLVVEVVTIILLMLALYYLP-SRTPGESSLPRILRDLLLAGGCGALVAVLAYAVLTRPYD 714

Query: 699 TTLSDYFAQQSVPGGHGRNIVNVILVDFRAFDTLGEVIVVVMASLVAISLL--------- 749
           T ++++F   S+ GG G N+VNVILVDFR FDTLGE+ V+ +A++   ++L         
Sbjct: 715 TGIAEFFLANSISGGGGTNVVNVILVDFRGFDTLGEITVLAIAAVGIFAMLDGLRLTHPT 774

Query: 750 --PKRTEQPQKIHSLIFATTAHIVTALMLMFSLYLLLRGHNAPGGGFIGALIAVIGFSLL 807
             P+        + LI  T + ++  L L+ S+++ LRGHN PGGGFI  LI  +  +L 
Sbjct: 775 CDPQGRRWAWAKNPLILMTLSRLLLPLALLISVFIFLRGHNLPGGGFIAGLITAVALALQ 834

Query: 808 LFAESPQYVRDRLHFSPLNIALFGILLSFMAGAMSVAVGLPFLTGLWWKEILP------L 861
             A    +V  RL  +   +A  G+L++ + G  S   G PFLT  +    LP      L
Sbjct: 835 YIASGVVWVEQRLPLNYQRMAGAGVLIAALTGLGSWVFGRPFLTSAFGHFELPLVGEFEL 894

Query: 862 GTPLLFDVGIYLAIIGGVMSMLLRV 886
            T +LFD+G+YL ++G    +L+ +
Sbjct: 895 ATAMLFDLGVYLTVVGATQMVLVNL 919