Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., hydrogenase 4 subunit B from Magnetospirillum magneticum AMB-1

 Score =  145 bits (365), Expect = 1e-38
 Identities = 133/468 (28%), Positives = 218/468 (46%), Gaps = 38/468 (8%)

Query: 29  LLFGWVFYWHQTGGNAWQVTWVPGLD-LNLSFRLDGLSFLFASLITGIGALIQIYALAYM 87
           LL G + +  QT G    +    GL  +   FRLD LS LF  ++    A    Y + Y 
Sbjct: 41  LLAGGIKHLGQTPGTGPAIVLPIGLPWMAAHFRLDNLSALFMVVVNLATAAASAYGIGYC 100

Query: 88  KEKAARFSFHLYLTLFMLAMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNA 147
                      +  LF+  M  V+++D+  +  + WE  +++S+LL+  +H    +R+ A
Sbjct: 101 SHLPEPRRVTPFYPLFLFGMNAVLIADDAFMFLVAWEFMSLSSWLLVLADHKNAENRQAA 160

Query: 148 LQSLLVTGAGGLALLA--GLILLGLMANSYQISVIIEHADHIAQHPWFMPSLILVLLGAF 205
              L++   G   LL   GL+  G  A S+  ++     D +A        ++L LLGA 
Sbjct: 161 FVYLVMACFGTFCLLTCFGLMAGGQGAYSFP-AMRAAKLDGVAG----FLVVLLALLGAG 215

Query: 206 TKSAQFPFHFWLPNAM-AAPTPVSAYLHSATMVKAGIYLLAR-LSPIYASSDF-WFYCLT 262
           +K+   P H WLP A  AAP+ VSA L S  M K  +Y L R L  ++    + W   + 
Sbjct: 216 SKAGLVPLHAWLPLAHPAAPSHVSA-LMSGVMTKVALYGLIRILFDLHGEVSWAWGAVMM 274

Query: 263 IVGAVTALWCALLAFKQTDLKLMLAYSTNVALGKLTLLLGLG-----------TEVALTA 311
            +G +TA+   L A  Q DLK +LAYST   +G + + LGL              +AL A
Sbjct: 275 AIGGITAVMGVLYAILQDDLKKLLAYSTVENIGVVVIGLGLAIAFKGSGEKTLAALALVA 334

Query: 312 AVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGNLKSVLLLSLIAAVIAALSKSGVAP 371
            +  I  HS +K   F+  G +  ATG R+  KLG L   +  + +AA++ A++ S + P
Sbjct: 335 GLYHIVNHSIFKTLWFLSAGAVITATGERDLGKLGGLTKRMPWNGVAALVGAIAISALPP 394

Query: 372 MLGFLSKEYMYKS----------SVESGIAWISLVLLLINALMVALAIALLYKPFFGQAT 421
           + GF+S+  +++S          +++ G+  +  +L L  AL  A  +      F G+  
Sbjct: 395 LNGFVSEWLIFQSLFKGPSLPHWAMKFGVPVVGAMLALAAALAAACFVRAYGIAFLGRPR 454

Query: 422 KESESHPPKAIEQKKSLWLPAMGLAIASFL--LPVFALDWINQHLVIP 467
            E+ +   +     +  W  A+  A+   L  +PV   D ++ H+V P
Sbjct: 455 SEAAAQAHQVPASMR--WTVALLAALCVVLGAIPVTVTDALS-HVVTP 499