Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., NADH dehydrogenase subunit N (NCBI) from Escherichia coli BW25113

 Score =  146 bits (368), Expect = 4e-39
 Identities = 129/441 (29%), Positives = 225/441 (51%), Gaps = 37/441 (8%)

Query: 26  LPILLFGWVFYWHQTGGNAWQVTWVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALA 85
           L ++L  WV    QT  +A ++ +  GL L++    DGL  LF +++  IG L  IY++ 
Sbjct: 45  LLLILALWVV---QTAADAGEI-FAAGLWLHI----DGLGGLFLAILGVIGFLTGIYSIG 96

Query: 86  YMKEKAAR--------FSFHLYLTLFMLAMLGVVVSDNILLLFIFWELTTITSYLLIGFN 137
           YM+ + A           ++ +  LF+  ML VV S+N+++++   E TT++S  L+G  
Sbjct: 97  YMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGI- 155

Query: 138 HDKPVSRKNALQSLLVTGAGGLALLAGLILLGLMANSY--QISVIIEHADHIAQHPWFMP 195
           + +  S + A + +++   G    L G +L+   A S   Q  + I  ++ + Q     P
Sbjct: 156 YGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDP 215

Query: 196 SLILV-----LLGAFTKSAQFPFHFWLPNAMA-APTPVSAYLHSATMVKAGIYLLARLSP 249
           +L+L+     L+G  TK+  FP H WLP+A + AP+PVSA L SA ++   + +L R   
Sbjct: 216 TLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALL-SAVLLNCALLVLIRYYI 274

Query: 250 IYAS---SDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLAYSTNVALGKLTLLLGLGTE 306
           I      SDF    L I G ++    A     Q D+K +LAYS+   +G + + LG+G  
Sbjct: 275 IICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGP 334

Query: 307 VALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGNLKSVLLLSLIAAVIAALSK 366
           + + AA+L I  HS  K  LF   GN+    GTR+   +  +  ++  + +     AL+ 
Sbjct: 335 LGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALAL 394

Query: 367 SGVAPMLGFLSKEYMYKSSVESGIAWISLVLLLINALMVALAIALLYKPFFGQATKESES 426
           +G+ P   FLS E+M   ++ +G+A   L+++++  L++ L +A L +     A +   +
Sbjct: 395 AGMPPFNIFLS-EFM---TITAGLARNHLLIIVLLLLLLTLVLAGLVR----MAARVLMA 446

Query: 427 HPPKAIEQKKSLWLPAMGLAI 447
            PP+A+ +    WL    + I
Sbjct: 447 KPPQAVNRGDLGWLTTSPMVI 467