Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., hydrogenase 4 membrane subunit (NCBI) from Escherichia coli BW25113

 Score =  166 bits (421), Expect = 2e-45
 Identities = 126/413 (30%), Positives = 216/413 (52%), Gaps = 21/413 (5%)

Query: 61  LDGLSFLFASLITGIGALIQIYALAYMKEKAARFS------FHLYLTLFMLAMLGVVVSD 114
           +D +S L   ++  +G L+ IY+  Y+ +K           ++ +L +F+ AM G+V+S 
Sbjct: 74  IDRVSTLILFVVVFLGLLVTIYSTGYLTDKNREHPHNGTNRYYAFLLVFIGAMAGLVLSS 133

Query: 115 NILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILLGLMANS 174
            +L   +F+E+T   S+ LI + +    ++++AL++LL+T  G L L      L L   +
Sbjct: 134 TLLGQLLFFEITGGCSWALISY-YQSDKAQRSALKALLITHIGSLGLYLAAATLFLQTGT 192

Query: 175 YQISVIIE-HADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPTPVSAYLHS 233
           + +S + E H D  A++  +      +L  A+ KSAQ P   WLP+AM APTP+SAYLH+
Sbjct: 193 FALSAMSELHGD--ARYLVYGG----ILFAAWGKSAQLPMQAWLPDAMEAPTPISAYLHA 246

Query: 234 ATMVKAGIYLLARLSPIYASSDFWFYCLTIVGA-VTALWCALLAFKQTDLKLMLAYSTNV 292
           A+MVK G+Y+ AR      +       + +V A VT L+  L+   Q D+K +LA+ST  
Sbjct: 247 ASMVKVGVYIFARAIIDGGNIPHVIGGVGMVMALVTILYGFLMYLPQQDMKRLLAWSTIT 306

Query: 293 ALGKLTLLLGL---GTEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGNLK 349
            LG +   L L   G+ +AL  ++ +I  H+F K+  F+V G +  + GTR   +L  + 
Sbjct: 307 QLGWMFFGLSLSIFGSRLALEGSIAYIVNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVL 366

Query: 350 SVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSVESGIAWISLVLLLINALMVALAI 409
             L L  +   +AAL+ +GV P  GF SK  ++ +     + +  L+  +I  ++ ++A 
Sbjct: 367 HTLPLPGVGFCVAALAITGVPPFNGFFSKFPLFAAGFALSVEYWILLPAMILLMIESVAS 426

Query: 410 ALLYKPFFGQAT--KESESHPPKAIEQKKSLWLPAMGLAIASFLLPVFALDWI 460
              +  +FG+    K SE+    A     S+ L  + L + S +  V A  W+
Sbjct: 427 FAWFIRWFGRVVPGKPSEA-VADAAPLPGSMRLVLIVLIVMSLISSVIAATWL 478