Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., NADH-quinone oxidoreductase subunit M from Erwinia tracheiphila SCR3

 Score =  120 bits (302), Expect = 2e-31
 Identities = 105/413 (25%), Positives = 187/413 (45%), Gaps = 18/413 (4%)

Query: 26  LPILLFGWVFYWHQTGGNAWQ----VTWVPGLDLNLSFRLDGLSFLFASLITGIGALIQI 81
           L + L G        GG  WQ    V+W+P   +N+   LDGLS L   ++TG+  ++ I
Sbjct: 44  LQLWLQGGYSLTQAAGGPKWQSEYLVSWIPRFGINVHLALDGLSLLMV-VLTGLLGVMAI 102

Query: 82  YALAYMKEKAARFSFHLYLTLFMLAMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKP 141
                  EK   F FHL L   +  ++GV ++ ++ L F FWE+  +  Y LI     K 
Sbjct: 103 LCSWNEIEKWQGF-FHLNLLWILGGVIGVFLAIDLFLFFFFWEMMLVPMYFLIALWGHKA 161

Query: 142 VSRKN----ALQSLLVTGAGGLALLAGLILLGLMANSYQISVIIEHADHIAQHPWFMPSL 197
              K     A +  + T A GL +L  ++ L +  N     V   + + + + P      
Sbjct: 162 SDGKTRITAATKFFIYTQASGLVMLIAILAL-VFVNYNATDVWTFNYEDLLKTPMSHTME 220

Query: 198 ILVLLGAF----TKSAQFPFHFWLPNAMA-APTPVSAYLHSATMVKAGIYLLARLSPIYA 252
            L++LG F     K    P H WLP+A + APT  S  L    +  A   LL    P++ 
Sbjct: 221 YLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFALPLFP 280

Query: 253 SSDFWFYCLTI-VGAVTALWCALLAFKQTDLKLMLAYSTNVALGKLTLLLGLGTEVALTA 311
            +   F  + + +G +   + A +AF Q D+K ++AY++   +G + + +  G+++A   
Sbjct: 281 HASAEFAPIAMWLGIIGIFYGAWMAFSQYDIKRLIAYTSISHMGFVLIAIYTGSQLAFQG 340

Query: 312 AVLFIFAHSFYKAALFMVVGNIDKATGTREREKLGNLKSVLLLSLIAAVIAALSKSGVAP 371
           AV+ + AH    AALF++ G + +   TR+  ++G L S +      ++  A++  G+ P
Sbjct: 341 AVVQMVAHGLSAAALFILCGQLYERLHTRDMRQMGGLWSRIKWLPALSLFFAVANLGM-P 399

Query: 372 MLGFLSKEYMYKSSVESGIAWISLVLLLINALMVALAIALLYKPFFGQATKES 424
             G    E+M  +     +  I +            ++ ++ + ++G    E+
Sbjct: 400 GTGNFVGEFMILTGSFQSVPAIIVTATFGLVFASVYSLVMMQRAYYGVPKSET 452