Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 679 a.a., hydrogenase 4 subunit B from Dickeya dianthicola ME23

 Score =  132 bits (331), Expect = 9e-35
 Identities = 104/398 (26%), Positives = 195/398 (48%), Gaps = 31/398 (7%)

Query: 56  NLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAAR--FSFHLYLTLFMLAMLGVVVS 113
           +L+ R D L+     +I+ + A+  +Y+LAY++E   R  ++  +++ LF+ +M+ +VV 
Sbjct: 80  HLTLRFDTLAAFMTLVISLLVAVSALYSLAYLEEYRGRGAWAMGVFMNLFVASMVALVVV 139

Query: 114 DNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQSLLVTGAGGLALLAGLILLGLMAN 173
           DN     + +E+ +++SY L+  + D+       L   L+  AG + ++    LL   ++
Sbjct: 140 DNAFYFIVLFEVMSLSSYFLVIADQDEEAVSAGLLY-FLIAHAGSVLIMIAFFLLYRHSS 198

Query: 174 SYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAM-AAPTPVSAYLH 232
           S   +    HA   A  P      +L   G   K+   P H WLP A  AAP+  SA L 
Sbjct: 199 SLDFADF-RHASLSA--PQASVVFLLAFFGFGAKAGMLPLHGWLPRAHPAAPSHASA-LM 254

Query: 233 SATMVKAGIYLLARLSP--IYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLAYST 290
           S  MVK G++ + ++    + A+  +W   +   GAV+++   L A  + D+K +LAY T
Sbjct: 255 SGVMVKIGVFGIIKVGVDLLGATEAWWGVVVLAFGAVSSVLGVLYALAEHDIKRLLAYHT 314

Query: 291 NVALGKLTLLLGLG-----------TEVALTAAVLFIFAHSFYKAALFMVVGNIDKATGT 339
              +G + + +G+G             + L   +  +  H+ +K  LF+  G +     T
Sbjct: 315 VENIGIILMGVGVGMIGIATHHPLLALLGLLGGLYHLLNHAVFKGLLFLGAGAVIYRVHT 374

Query: 340 REREKLGNLKSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKS----SVESGI----- 390
           ++ EK+G L  ++  + +A ++  ++ S + P+ GF+S+ + Y+S    S + GI     
Sbjct: 375 KDMEKMGGLSRLMPRTALAFLVGCMAISALPPLNGFVSEWFTYQSLFTLSHDGGIGLRLV 434

Query: 391 AWISLVLLLINALMVALAIALLYK-PFFGQATKESESH 427
           A I++V+L I   + A+    +Y   F G    E  +H
Sbjct: 435 APIAIVMLAITGALAAMCFVKVYGISFCGAPRSEKAAH 472



 Score = 26.6 bits (57), Expect = 0.005
 Identities = 15/45 (33%), Positives = 20/45 (44%)

Query: 232 HSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLA 276
           H    V  G+  ++R        DF  YCL +V A+  L  A LA
Sbjct: 635 HVVMPVVNGVQRISRAVQWIQHGDFRVYCLYVVAALVVLLLATLA 679