Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 988 a.a., NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic from Azospirillum sp. SherDot2

 Score =  458 bits (1179), Expect = e-133
 Identities = 300/913 (32%), Positives = 476/913 (52%), Gaps = 62/913 (6%)

Query: 33  WVFYWHQTGGNAWQVT--WVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEK 90
           W  Y   + G   + T  W+P L L+ S R+DG ++LFA L+ G+GAL+ +YA  YM  +
Sbjct: 48  WAAYPTVSAGGVLRFTAGWMPSLGLDFSLRMDGFAWLFAGLVFGVGALVVVYARYYMAAE 107

Query: 91  AARFSFHLYLTLFMLAMLGVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKNALQS 150
                F  +L  FM +M GVV+S N++ L  FWELT++ S+LLIG+ H    +R  A  +
Sbjct: 108 DPVPRFFAFLLAFMGSMTGVVLSGNLIQLAFFWELTSLFSFLLIGYWHHTAAARDGARMA 167

Query: 151 LLVTGAGGLALLAGLILLGLMANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQ 210
           L VT  GGL L AG+++LG +  SY++  ++   D I  HP ++P+L+L+LLGA TKSAQ
Sbjct: 168 LTVTATGGLCLFAGVLILGHIVGSYELDAVLAAGDLIRAHPLYLPALVLILLGALTKSAQ 227

Query: 211 FPFHFWLPNAMAAPTPVSAYLHSATMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTAL 270
           FPFHFWLP+AMAAPTPVSAYLHSAT+VKAG++L+ARL P+ A ++ WF+ +   G  T L
Sbjct: 228 FPFHFWLPHAMAAPTPVSAYLHSATLVKAGVFLMARLWPVLAGTEAWFWIVGSAGLATLL 287

Query: 271 WCALLAFKQTDLKLMLAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVV 330
             A +A  Q DLK +LAYST   LG +TLLLGL +E+A+ AA+  +  H+ +KA+LFM  
Sbjct: 288 LGAYVAIFQHDLKGLLAYSTISHLGLITLLLGLNSELAMVAAIFHVINHATFKASLFMAA 347

Query: 331 GNIDKATGTREREKLGNLKSVLLLSLIAAVIAALSKSGVAPMLGFLSKEYMYKSSVESG- 389
           G ID  TGTR+  +L  L   +  +   A+IAA + +GV  + GFLSKE  +  ++ +  
Sbjct: 348 GIIDHETGTRDIRRLSGLNRFMPFTARLALIAAGAMAGVPLLNGFLSKEMFFAEALSAKD 407

Query: 390 -----IAWISLVLLLINALMVALAIALLYKPFFGQATKESESHPPKAIEQKKSLWLPAMG 444
                   + +  ++ +A  VA ++  ++  FFG    +    P K  E    +  P   
Sbjct: 408 PLPVFFDILPVAAMVASAFSVAYSLRFIHGTFFGP---DPVDLPHKPHEPPAWMRFPVEV 464

Query: 445 LAIASFLLPVFALDWINQHLVIPAVMAMDPNSVPQAAKLWQGFNIPLALSGITLVLGGVL 504
           L +A  ++ +     +  +L + A  A+   +   +  +W GFN+PL +S      G +L
Sbjct: 465 LVLACIVIGILPAATVGPYLDMAARAALGAATPEYSLAVWHGFNLPLVMSMAAFAAGLIL 524

Query: 505 YLNYATLVTWLTRLVKPLP-----KAEQMFDAVLAYLA-TLASWQTQMLQQKRSSGYMLL 558
           Y     L + L + ++  P     +  +MF+  + +L+  LA     +L  +R    + L
Sbjct: 525 Y---RLLQSHLAKGIEGPPLIRSLEGRRMFERTMVFLSWRLARTAEGVLGTRRLQPQLRL 581

Query: 559 FFAVLALIL---IYQPLPLPATFSASLFDVHFYEVAIALALIASALLCVLSTSRLLSVLA 615
             A   L     ++     P     S  D     + +  A  A          RL +++ 
Sbjct: 582 VVAAAVLAAGWTVWTRGVGPGNLVPSGIDPVLALIWLLGAACALGAAWQAKFHRLAALIL 641

Query: 616 LGMAGFMTTLVFMIYSAPDVAKTLLLVETLMVVFVVLLMRHVPYLSTVARH------SVP 669
           LG  G +  + F+ +SAPD+A T LLVE +  + ++L +R +P     A        ++ 
Sbjct: 642 LGGTGLVVCVTFVWFSAPDLALTQLLVEVVTTILLLLGLRWLPKRMGGAGGRGSEAVTLT 701

Query: 670 RRTLNAVIASVIGASVTLILLNITAHPIDTTLSDYFAQQSVPGGHGRNIVNVILVDFRAF 729
           RR  +  IA   GA +  +   +        L+ +F + +   G G N+VNVILVDFR F
Sbjct: 702 RRLRDLGIAVAAGAGMAGLAFGVMTRFPPELLARHFLELAYSEGGGTNVVNVILVDFRGF 761

Query: 730 DTLGEVIVVVMASLVAISLLPK--------RTEQPQKIHSLIFATT-------------- 767
           DT+GE+ V+ + ++ A +LL +           + Q+  S   A+               
Sbjct: 762 DTMGEIAVLGVVAMTAYALLRRFRPASDSVDVPEQQRDQSAFDASRPDRKDGDTVADWLF 821

Query: 768 -----AHIVTALMLMFSLYLLLRGHNAPGGGFIGALIAVIGFSLLLFAESPQYVRDRLHF 822
                A ++  ++L+ +L+LLLRGH+ PGGGF   L   I   L       Q+V  RL  
Sbjct: 822 IPSLIARLLFPVILLVALFLLLRGHDLPGGGFAAGLTVAIAMILQYMFGGTQWVEARLRV 881

Query: 823 SPLNIALFGILLSFMAGAMSVAVGLPFLTGLW-WKEI-----LPLGTPLLFDVGIYLAII 876
            P+     G+LL+   G  +     PFLT  + + +I     +P+ + LLFD+G++  ++
Sbjct: 882 LPMRWMGIGLLLAAGTGLGAWMFDRPFLTSYFAYSQIPVLGKVPVASALLFDIGVFALVV 941

Query: 877 GGVMSMLLRVKEE 889
           G  + +L+ +  +
Sbjct: 942 GATILILIALARQ 954