Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 665 a.a., NADH ubiquinone oxidoreductase chain L from Agrobacterium fabrum C58

 Score =  209 bits (533), Expect = 3e-58
 Identities = 136/435 (31%), Positives = 227/435 (52%), Gaps = 38/435 (8%)

Query: 20  LLPFAVLPILLFGWVFYWHQTGGNAWQVT---WVP--GLDLNLSFRLDGLSFLFASLITG 74
           ++  A+L  ++F  V   H   G   +VT   W+   G+D+  +FR+D L+ +   ++  
Sbjct: 37  MIVVAILSWIVFFNVALAHGEPGEVIKVTVLRWIQSGGIDVEWAFRIDTLTAVMFVVVNT 96

Query: 75  IGALIQIYALAYMKEKAARFSFHLYLTLFMLAMLGVVVSDNILLLFIFWELTTITSYLLI 134
           +  L+ +Y++ YM     R  F  YL+LF  AML +V SDN+L +F  WE   + SYLLI
Sbjct: 97  VSTLVHLYSIGYMHHDPHRPRFFAYLSLFTFAMLMLVTSDNLLQMFFGWEGVGLASYLLI 156

Query: 135 GFNHDKPVSRKNALQSLLVTGAGGLALLAGLILLGLMANSYQISVIIEHAD--------- 185
           GF   KP +   A+++ +V   G    + G+  + ++  S  +  +   A          
Sbjct: 157 GFWFKKPSASAAAMKAFIVNRVGDFGFILGISGVFVLFGSINLETVFAAASTYLPAEGAA 216

Query: 186 -----------HIAQHPWFMPSLILVLLGAFTKSAQFPFHFWLPNAMAAPTPVSAYLHSA 234
                       + +        +L+ +GA  KSAQF  H WLP+AM  PTPVSA +H+A
Sbjct: 217 STGTVINLFGMQLDKANAITGVCLLLFMGAMGKSAQFLLHTWLPDAMEGPTPVSALIHAA 276

Query: 235 TMVKAGIYLLARLSPIYASSDFWFYCLTIVGAVTALWCALLAFKQTDLKLMLAYSTNVAL 294
           TMV AG++L+AR+SP++  S      +T++GA+TA + A +   Q D+K ++AYST   L
Sbjct: 277 TMVTAGVFLVARMSPLFELSPDALTVVTLIGAITAFFAATVGLVQNDIKRVIAYSTCSQL 336

Query: 295 GKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVGNIDKAT-GTREREKLGNLKSVLL 353
           G + + LG+G   A  AAV  +F H+F+KA LF+  G++  A  G ++   +G L+  + 
Sbjct: 337 GYMFVALGVG---AYGAAVFHLFTHAFFKALLFLCAGSVIHAVDGEQDMRYMGGLRKHIP 393

Query: 354 LSLIAAVIAALSKSGVA------PMLGFLSKEYMYKSSV--ESGIAWISLVLLLINALMV 405
           ++     +  L+ +GV          GF SK+ + +S+    S ++  +  LL+I AL  
Sbjct: 394 ITFWTMTVGTLALTGVGIPGTMIGFAGFFSKDVIIESAYASHSVLSGFAFTLLVIAALFT 453

Query: 406 AL-AIALLYKPFFGQ 419
           +  +  L +  FFG+
Sbjct: 454 SFYSWRLAFMTFFGK 468