Pairwise Alignments

Query, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., NADH-quinone oxidoreductase subunit M from Acinetobacter radioresistens SK82

 Score =  119 bits (299), Expect = 4e-31
 Identities = 116/424 (27%), Positives = 194/424 (45%), Gaps = 38/424 (8%)

Query: 49  WVPGLDLNLSFRLDGLSFLFASLITGIGALIQIYALAYMKEKAARFSFHLYLTLFMLAML 108
           W+  L +N+   +DGLS L   L   +G L    +   +++      FHL L   +  ++
Sbjct: 75  WIQTLGINIHLAVDGLSLLMVGLTALLGVLAVGCSWGEIQKNVG--FFHLNLLWSLGGVI 132

Query: 109 GVVVSDNILLLFIFWELTTITSYLLIGFNHDKPVSRKN----ALQSLLVTGAGGLALLAG 164
           GV ++ ++ L F FWE+  +  Y LI     K  + ++    A +  + T   GL +L G
Sbjct: 133 GVFLAIDMFLFFFFWEMMLVPIYFLIALWGHKGSNGRSRVYAATKFFIYTQVAGLIMLIG 192

Query: 165 LI--------LLGLMANSYQISVIIEHADHIAQHPWFMPSLILVLLGAFTKSAQFPFHFW 216
           ++        + G +  SY   + + +A            +I + +G   K   FP H W
Sbjct: 193 ILGLVIYGYMMTGTINFSYNYLLGVANALDTQLPSVAYAFMICMFIGFAVKLPVFPLHGW 252

Query: 217 LPNAMA-APTPVSAYLHSATMVKAGIYLLARLSPIY--ASSDFWFYCLT--IVGAVTALW 271
           LP+A A APT  S  L    +  A   LL  + P +  AS+DF    +   ++G     W
Sbjct: 253 LPDAHAQAPTAGSVDLAGILIKTAAYGLLRFVIPFFPAASADFANIAIIFGLIGIFYGAW 312

Query: 272 CALLAFKQTDLKLMLAYSTNVALGKLTLLLGLGTEVALTAAVLFIFAHSFYKAALFMVVG 331
           CA   F+QTD+K +LAY++   +G + L L  G  +     ++ + AH    AALF++ G
Sbjct: 313 CA---FQQTDMKRLLAYTSISHMGFVLLALYAGNILTFQGLMIMMLAHGLSSAALFIMCG 369

Query: 332 NIDKATGTREREKLGNLK---SVLLLSLIAAVIAALSKSGVAPMLG-FLSKEYMY-KSSV 386
            I +   TR+   +G ++     L   L+  V A +   G+   +G FL     Y K  V
Sbjct: 370 QIYERLHTRDMRLMGGIRGQFQYLPFFLMFFVAALVGIPGLGNFIGEFLILMGSYAKFPV 429

Query: 387 ESGIAWISLVLLLINALMVALAIALLYKPFFG---QATKESESHPPKAIEQKKS--LWLP 441
            + +A +SLV   +  L+      L++K  FG   +  K+  SHP K +  ++   L + 
Sbjct: 430 FTILAAVSLVFAGLYGLI------LIHKALFGVPNEEQKQHYSHPLKDLNAREMVILLIC 483

Query: 442 AMGL 445
           A+GL
Sbjct: 484 ALGL 487