Pairwise Alignments

Query, 498 a.a., Na+/H+ antiporter subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., monovalent cation/H+ antiporter subunit D from Pseudomonas simiae WCS417

 Score =  236 bits (601), Expect = 2e-66
 Identities = 169/549 (30%), Positives = 271/549 (49%), Gaps = 75/549 (13%)

Query: 6   LTLPVVISLLTAVAIFLAG-RNRWLTNGLSVICSVINLFTGALLTITIYTHGPASIAF-- 62
           +  P+++ LLTA  + + G + R L   +++  SVI L    LL       GP SI    
Sbjct: 8   IVAPILLPLLTAALMLMLGEKRRPLKAKINLFSSVIGLGIAILLLYWTQKGGPGSIGVYL 67

Query: 63  -GQWPAPFGIVFVADLLSVGMVMVTAIIGLVSVIYAIADLSAKPSYARYHALLHVLLAGV 121
            G W  PFGIV V D LS  M+++T IIG+ ++++A+A      +   +HAL  + + G+
Sbjct: 68  PGNWQVPFGIVLVVDQLSALMLVLTGIIGVSALLFAMARWDRAGT--SFHALFQIQMMGL 125

Query: 122 YGAFLTGDIFNLYVWFEVMLIASFGLMVLDANQQQIDGAIKYVLLNLISTLVFLLSIGLL 181
           YGAFLT D+FNL+V+FEV+L AS+GLM+  + + ++   + Y+ +NL+++ +FL+   ++
Sbjct: 126 YGAFLTADLFNLFVFFEVLLAASYGLMLHGSGRARVSSGLHYIAINLLASSLFLIGAAMI 185

Query: 182 YGATGTLNLADLHDKAQSLAPEMKTML----AGLLLFAFSIKAALFPLFAWLPASYHTLP 237
           YG TGTLN ADL  K   L PE    L    A +L  AF  KA ++PL  WL  +Y +  
Sbjct: 186 YGVTGTLNFADLALKI-PLVPEADRGLLHAGAAILATAFLAKAGMWPLNFWLAPAYSSAS 244

Query: 238 SAIVALFAALLTKVGVYALLRVFTLVF-------PLDGSGWQPVLLGIAALTMLTGVLGA 290
           + + A+F A++TKVGVY +LR++TL+F        L G  W  ++ G  A  +  G+   
Sbjct: 245 APVAAMF-AIMTKVGVYTVLRLWTLLFSGQAGASALFGGDW--LVYGGMATILCAGLAMV 301

Query: 291 ASQYDIKKILSFHIISQIGYMIMGLAIYTPLAITGAIFYVIHHILVKGNLFLIGGLIGRK 350
           A+Q  ++++ S  I+   G ++  +    P    GA+FY++   L    LFL+  LI R 
Sbjct: 302 AAQ-RLERMASLSILVSAGILLSAVGFAQPSLTAGALFYLVSSTLALSALFLLAELIERS 360

Query: 351 YGTTQL--------------------------TQLGGVYRAMPW----LTFGFLLAAFSL 380
                L                           Q   V + +PW    L   F+  A  +
Sbjct: 361 RSANDLPLDEEIDALPKAMESLHPRPGVNLDDEQKAVVGQVIPWTMAFLGLSFVACALLI 420

Query: 381 AGFPPLSGFWGKF-------------LVIKASLAAELYWLAAIALLVGLLTIFSMTKIWN 427
            G PPLSGF GK              + I A +    + L A+ +L GL ++ +  ++  
Sbjct: 421 IGMPPLSGFIGKLSLLSALVNPLGLGVSIDAPIRPAAWGLVALLILSGLASLIAFARLGI 480

Query: 428 EVFW--KDAPAALQQETLARSTLGLYALPILVLTLFSLVIGLAAQPFYQFATLAAEQLLT 485
           + FW  ++ P+ L +            LPI  L   S+++   A+P  ++    A  L  
Sbjct: 481 QRFWTPEERPSPLLRR--------YECLPIFFLLGLSILLTFKAEPLMRYTQDTAVSLNN 532

Query: 486 PTAYIHAVL 494
           P  Y+ AV+
Sbjct: 533 PEHYVMAVM 541